PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHU20357.1
Organism
Capsicum chinense
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family GeBP
Protein Properties Length: 294aa    MW: 32918.8 Da    PI: 10.1455
Description GeBP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHU20357.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF573116.51.5e-3672167298
      DUF573   2 lfqrlwseeDeivlLqGlidfkaktgkspsddidafyefvkksisfkvsksqlveKirrLKkKfkkkvkkaksgkepsfskehdqkifelskkiWgs 98 
                 lfqrlwse+De+++L+G+ d+++k++++p++d+ af+e +kks++++vsk ql +KirrLKkK+ ++  k ++gke +++k+h+qk++elskkiWg+
  PHU20357.1  72 LFQRLWSEDDEVAILKGMSDYRSKKKADPVADLGAFHESIKKSLHVDVSKAQLQDKIRRLKKKYMNNAGK-EKGKERVLTKAHEQKVYELSKKIWGK 167
                 79********************************************************************.9***********************95 PP
Sequence ? help Back to Top
Protein Sequence    Length: 294 aa     Download sequence    
MDVPKKSSPK PRSKSDASAK LVSPKKSSST IGAKRAAGEG EAKESKKSKK KQEKEVETPV  60
KKPVNEDVKR QLFQRLWSED DEVAILKGMS DYRSKKKADP VADLGAFHES IKKSLHVDVS  120
KAQLQDKIRR LKKKYMNNAG KEKGKERVLT KAHEQKVYEL SKKIWGKEKS DKGDQVEVVK  180
VDNVAASKGR QDGGVKDNGV LFEVKEEKPS AEVEKDVEVK RNLNLIPCVE NVAGLEKWLE  240
ENSGVLSVEK RNAMKEKWEA LKAAEADLCL RRVKLIAEQM ELVLEAVRDS GTET
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G00390.13e-27GeBP family protein