PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PHU20287.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
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Family | FAR1 | ||||||||
Protein Properties | Length: 159aa MW: 18546.8 Da PI: 7.1122 | ||||||||
Description | FAR1 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | FAR1 | 29.1 | 3.2e-09 | 39 | 97 | 32 | 90 |
FAR1 32 tfvCskegkreeekkk.tekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90 +f+ ++e +++ ++ + +++++r+r e r++C a++k k + ++ wev +++ H+H++ PHU20287.1 39 EFNSKEESYNAYNSYAvARERKRQRLEYRCDCMARIKFKIS-NKIWEVCEFNDVHSHPMI 97 555556666666655566777889999999****9999999.***************985 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 159 aa Download sequence |
MEDAHVNKGK DSSVQEDFNV NEPNICNTSK NFVFEIGMEF NSKEESYNAY NSYAVARERK 60 RQRLEYRCDC MARIKFKISN KIWEVCEFND VHSHPMIEDN LKHFIHSGRR LTNTTKNILG 120 SMIDAGIHTK KVVRYLQNEA GRVENVGFIE QDAYNFVQA |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G38180.1 | 1e-10 | FAR1 family protein |