PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHU19979.1
Organism
Capsicum chinense
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family MYB
Protein Properties Length: 309aa    MW: 35895.8 Da    PI: 9.853
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHU19979.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding551.9e-171863147
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47
                     rg W + Ede+l  +v+q+G+ +W++Ia++++ gR++k+c++rw++ 
       PHU19979.1 18 RGHWRPAEDERLRLLVEQYGPQNWNSIAEKLQ-GRSGKSCRLRWFNQ 63
                     899*****************************.***********996 PP
2Myb_DNA-binding61.32e-1970114147
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                      r ++T+eE+e+lv a++ +G++ W++I+r ++ gRt++ +k++w+ +
       PHU19979.1  70 RRPFTEEEEERLVAAHRIHGNK-WALISRLFP-GRTDNAVKNHWHVL 114
                      679*******************.*********.***********987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 309 aa     Download sequence    
MAEGGGYGDD TRSSCCPRGH WRPAEDERLR LLVEQYGPQN WNSIAEKLQG RSGKSCRLRW  60
FNQLDPRINR RPFTEEEEER LVAAHRIHGN KWALISRLFP GRTDNAVKNH WHVLMARKQR  120
EQSKICGKRS LYQQQHDNFL SDSKSPSYGF RRRNINNNNN MTKTHEGNYG SKINFFEFQN  180
PNKDRVFSMS STYSSNSHDF CRRNGSHLVR ESSIDQKSLC QNNLSFLSHG GGANYSYKRS  240
TIIRNPFSYA DRNESNGITE RVVNITDGKF SLEKMLRESI EQQQQQYGEE ARERKDIPFI  300
DFLGVGISS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G17950.13e-66MYB family protein