PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PHU19751.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
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Family | MYB | ||||||||
Protein Properties | Length: 332aa MW: 37642.5 Da PI: 6.9309 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 57 | 4.5e-18 | 14 | 61 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg+WT+eEd +++ +v+ +G g+W++++++ g++R++k+c++rw +yl PHU19751.1 14 RGPWTAEEDAKILAYVASHGIGNWTLVPQKAGLNRCGKSCRLRWTNYL 61 89********************************************97 PP | |||||||
2 | Myb_DNA-binding | 45.3 | 2e-14 | 68 | 110 | 2 | 46 |
SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 +++T E+e +++++k G++ W++Ia++++ gRt++++k++w++ PHU19751.1 68 DNFTSLEEECILELHKTIGSR-WSLIAKRLP-GRTDNDVKNYWNT 110 589******************.*********.***********97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 332 aa Download sequence |
MGRPPCCDKA NVKRGPWTAE EDAKILAYVA SHGIGNWTLV PQKAGLNRCG KSCRLRWTNY 60 LRPDLKHDNF TSLEEECILE LHKTIGSRWS LIAKRLPGRT DNDVKNYWNT KLKKKLVNMG 120 IDPVTHKPFA QVFAEYGKIS GLPIQNAKNH IHLPNNTTEK NHVCMESKQF PFSNGTPHDK 180 FVHKIMNDQL QENYTKNYTW DSKETLQTHS SLLISTSTSC NPTVHSYSPS FSSVQSQVHT 240 MPASTSTCNW NEFIFGDPFT SSGAEQKQET FLSNLLQKEN PTCGEVTEVE EKQLVEEATC 300 SSAMDSFVDT ILANEKQMLM DFPPLLDVYL DY |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G28470.1 | 1e-77 | MYB family protein |