PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PHU19162.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
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Family | bHLH | ||||||||
Protein Properties | Length: 249aa MW: 28483.2 Da PI: 4.7206 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 17.3 | 8.5e-06 | 160 | 197 | 12 | 54 |
HHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 12 RRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 R +++ +++ L++l+ + +K + a++L++A++YI+ L PHU19162.1 160 RKEKLGDRITALQQLVSPF-----GKTDTASVLQEAIDYINFL 197 67788899********998.....8***************998 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 249 aa Download sequence |
MVFQELTKND QNLLVDSTLQ ILDINGNSSS SSSSQDWNHS LQEVLTNSSQ NYQHQNELMR 60 NFSSISNQDF TNYYSNLIQT LFDSANEDHN QEQQPQQSLF ANNNNPPIND FEPSLPKSNI 120 EEIGESKSRL SIITKNSTNE PTYKRQRIET PSPLPTFKVR KEKLGDRITA LQQLVSPFGK 180 TDTASVLQEA IDYINFLHDQ VNVLRTQFVK NGSSTQHQQE HSHLDDGCWS NYCCPDEKEL 240 SLSFVLLQH |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G61660.3 | 2e-33 | bHLH family protein |