PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHU18722.1
Organism
Capsicum chinense
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family GATA
Protein Properties Length: 335aa    MW: 36825.2 Da    PI: 6.1052
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHU18722.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA57.32.2e-18233266134
        GATA   1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkg 34 
                 C++C  tkTp+WR gp g+ktLCnaCG++y++ +
  PHU18722.1 233 CQHCEITKTPQWRAGPMGPKTLCNACGVRYKSGR 266
                 *******************************987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 335 aa     Download sequence    
MGSNVVVDEV DCGSFFDHID DLIDFPLENE NVGLGSTDCK DFPSIWNDPL PDSDSLFSVS  60
HRNSASDLSA ELSVPYEDII QLEWLSTFVE DSFSGGGLTL GKENIPVEKE PSSQGKFQTL  120
SPVSVLESSS SSSSNSSFSS SGEKTLPLGP CHRGPQRART KRPRPTTFNP LPVFVAPGFP  180
TDQSENFAES PMKKILKLAA PEQKKKKKIK FSIPLAPFET NHNPTAQQSV RKCQHCEITK  240
TPQWRAGPMG PKTLCNACGV RYKSGRLFPE YRPAASPTFV PSLHSNSHKK VLEMRTTIVQ  300
DNNNATLMTP PPDTTTTTQP EFNPSNNDSV EQEHK
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1161165KRPRP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G32890.12e-40GATA family protein