PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHU18494.1
Organism
Capsicum chinense
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family GATA
Protein Properties Length: 204aa    MW: 21875.9 Da    PI: 10.4942
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHU18494.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA581.3e-183670135
        GATA  1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkgl 35
                C+ Cgt+kTplWR gp g+k+LCnaCG++ rkk++
  PHU18494.1 36 CVDCGTSKTPLWRGGPAGPKSLCNACGIKSRKKRR 70
                ********************************986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 204 aa     Download sequence    
MVDLSDKGLV SDEMSSETTS PVKSSPETSQ SNVKTCVDCG TSKTPLWRGG PAGPKSLCNA  60
CGIKSRKKRR ALLGLDKEDK KPKKSVSSGH KNIGGLQHPN QSCNSSNSTS GEEDSGSTSF  120
VKNIVSSSLK KKLLPFGREE VLQKPRSRST QKRKLGEVEQ AAFLLMALSC GSFYNQRRTK  180
MDNARKTAKC CGTLGSKSST LLVG
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G06740.15e-33GATA family protein