PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PHU18340.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
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Family | ERF | ||||||||
Protein Properties | Length: 376aa MW: 41712.5 Da PI: 4.8018 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 60.5 | 3.8e-19 | 81 | 131 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkr..krfslgkfgtaeeAakaaiaarkkleg 55 ++y+GVr++ +g+WvAeIr+p + r +lg+f ta eAa a+++a+++++g PHU18340.1 81 CKYRGVRQRT-WGKWVAEIREP-----HrgSRLWLGTFATAIEAALAYDEAARAMYG 131 79*****999.**********6.....337************************998 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 376 aa Download sequence |
MAILDQAPNM MLPLDYTRKR KSRSRKDAPK NVAETLARWK EVNEKQDSCD DDGRKPVRKV 60 PAKGSKKGCM KGKGGPENAR CKYRGVRQRT WGKWVAEIRE PHRGSRLWLG TFATAIEAAL 120 AYDEAARAMY GPCARLNLPD YNSSKESSKD ESSLPTVSHS GSNTASSFSE VCPADGMKGR 180 ASVPQIIHED GESEIKVDGT RIGSDECGTP LSTLREVVKD ETKGVLNTKV KEEPIAFEYD 240 PVLSGQGSLD SFSWNDDMFD VDELLSMIDS APLDASAPNQ DVGVPPQHKH YTYDPAYQFQ 300 TNQLSDPSCL LKNADYQFSN PSYQMENAVG NTLEGLQQVK QQAPLTDDFD FDFLKPGREE 360 DFNFCLDDLG LLDFGV |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 17 | 22 | TRKRKS |
2 | 20 | 27 | RKSRSRKD |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G05410.1 | 6e-39 | ERF family protein |