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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PHU18261.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
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Family | GATA | ||||||||
Protein Properties | Length: 250aa MW: 28211.8 Da PI: 8.6093 | ||||||||
Description | GATA family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | GATA | 60.5 | 2.2e-19 | 182 | 216 | 1 | 35 |
GATA 1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkgl 35 C++Cg+ kTp+WR gp g+ktLCnaCG++y++ +l PHU18261.1 182 CQHCGVDKTPQWRGGPTGPKTLCNACGVRYKSGRL 216 *******************************9986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 250 aa Download sequence |
MKMEIMDTTC FMVDDDILNF SLDDEKYQTS SSSFESSNTI GFLPHDHHSH SFPDFVEEEL 60 EWLSNKDAFP AVEFDIFSDD IPSVIFDHHS PVSVLENSST TTTSHSSCNV NVKENAVMSR 120 APGILQVPVN HPVGARSKRR RRTAFAEWGN QVKLKNTTKQ RLTLLSKPMT KAKKATSIGR 180 RCQHCGVDKT PQWRGGPTGP KTLCNACGVR YKSGRLLPEY RPANSPTFSA DLHSNSHRKV 240 LEMRKQRIME |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G24050.1 | 4e-49 | GATA family protein |