PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PHU18035.1

Organism

Capsicum chinense

Taxonomic ID

80379

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum

Family

NF-YA

Protein Properties

Length: 463aa MW: 51466.5 Da PI: 7.6752

Description

NF-YA family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PHU18035.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	CBFB_NFYA	27.8	8.4e-09	380	397	3	20
CBFB_NFYA 3 plYVNaKQyqrIlkRRqk 20 p+YVNaKQy++IlkRRq+ PHU18035.1 380 PIYVNAKQYSAILKRRQA 397 9***************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 463 aa Download sequence
MRNSFLQHVV TQEGWSKLVV PVLPKAESLF RAIRVVKRAN FFNNLYSFLQ LAMNSVQSRF 60 CNKNSEDTAP DSQPHSTPSI APIGFAESKL PLDSKELFMC PAKPRKEGKA RSLVQVQDGL 120 AAPGKRIEET SNYFMHAPLG SRGYSSVGRA SLLQFDHCDY GLDIQLSRRC IPFPPLASPS 180 LSRLHFFNPA VLLPLYSMGS LLPSHWKEPD KEQEIEATQF QRLRMISTHA EGDVWDKSPI 240 SCSVVVTTIS HYHSCLIGKV VDKNLKLFGE LRVIDGSTFT MSPVTNPQAT LFMLGCDQLE 300 HALSKKTVVE SILKHHSDIK KSESEFQDQD STSTLSTGQS NHMEAAMGKS KTVLQNLITH 360 PVGVTSTRVA LPLEYTKSLP IYVNAKQYSA ILKRRQAGGN ISSYMVQHSE SGSWETSTQS 420 GSDATSIFNG DDIFQQPEFR VSGFPFHMGD TMQEAEDFMH VGT

Sequence ? help Back to Top

Protein Sequence Length: 463 aa Download sequence

MRNSFLQHVV TQEGWSKLVV PVLPKAESLF RAIRVVKRAN FFNNLYSFLQ LAMNSVQSRF  60
CNKNSEDTAP DSQPHSTPSI APIGFAESKL PLDSKELFMC PAKPRKEGKA RSLVQVQDGL  120
AAPGKRIEET SNYFMHAPLG SRGYSSVGRA SLLQFDHCDY GLDIQLSRRC IPFPPLASPS  180
LSRLHFFNPA VLLPLYSMGS LLPSHWKEPD KEQEIEATQF QRLRMISTHA EGDVWDKSPI  240
SCSVVVTTIS HYHSCLIGKV VDKNLKLFGE LRVIDGSTFT MSPVTNPQAT LFMLGCDQLE  300
HALSKKTVVE SILKHHSDIK KSESEFQDQD STSTLSTGQS NHMEAAMGKS KTVLQNLITH  360
PVGVTSTRVA LPLEYTKSLP IYVNAKQYSA ILKRRQAGGN ISSYMVQHSE SGSWETSTQS  420
GSDATSIFNG DDIFQQPEFR VSGFPFHMGD TMQEAEDFMH VGT