PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHU17912.1
Organism
Capsicum chinense
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family Trihelix
Protein Properties Length: 338aa    MW: 37876.3 Da    PI: 6.4214
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHU17912.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix86.14.4e-2739133186
    trihelix   1 rWtkqevlaLiearremeerlrrgk.........lkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqle 86 
                 rWt+qe+l+Li++++  e+r+rrg+         + +p+W++vs++++++g++r+p+qC+++w+nl++++kkike+e++ ++e++s + + ++l+
  PHU17912.1  39 RWTRQEILVLIQGKKVAENRIRRGRtgslefgsaQVEPKWASVSSYCKKHGVNRGPVQCRKRWSNLAGDFKKIKEWESQIKEETESFWLMRNDLR 133
                 8*********************98666677777799********************************************999999999888876 PP
Sequence ? help Back to Top
Protein Sequence    Length: 338 aa     Download sequence    
MKLERLNLTP SIVNADSDVR QQSFNGGADD ANKVARLPRW TRQEILVLIQ GKKVAENRIR  60
RGRTGSLEFG SAQVEPKWAS VSSYCKKHGV NRGPVQCRKR WSNLAGDFKK IKEWESQIKE  120
ETESFWLMRN DLRREKKLPG FFDREVYDIL DRGTGSGNGD EEEGLVLALG SSGVAEESEV  180
LFDSGKSAAA GDDGLFSDFE PLQDEVGATS HEDFPPINQL PIPAPTPISE QKHQPLSQVS  240
PTQGTSHQKQ PIREPDIGCG QEGRKRKRDD SDADEESSNL QRHLVRALER NGKMVSTQLE  300
AQNMHFQKDR EQRKDHVDNL VAVLNKLADA LGRIADKL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G33550.11e-107Trihelix family protein