PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHU17788.1
Organism
Capsicum chinense
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family bHLH
Protein Properties Length: 265aa    MW: 29387.3 Da    PI: 10.0261
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHU17788.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH37.35e-12119165455
                 HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
         HLH   4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                 +h + ErrRRdri ++   L el+P++      K   a++L +A++YI+ Lq
  PHU17788.1 119 MHRMSERRRRDRIANKVKVLAELIPNC-----NKSGRASVLDQAIQYIQALQ 165
                 79************************8.....4666678************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 265 aa     Download sequence    
MSKWNLSLDS SSLEEGGVSE KLNLSHLKVD EVPEKNFWDH PSSLTQLTLG VPGVENHDAK  60
FGTNYSSSPY LENQHVSRGK KRKCGENLVS VVDANGSGIP LRANEDGLKQ YPKASSVEMH  120
RMSERRRRDR IANKVKVLAE LIPNCNKSGR ASVLDQAIQY IQALQHQVQV MSMDGIPAWH  180
SASTLIARRK QIMQSTVHFN PYMPIMHRIA VGYFGGFGKS INHNNMFSSN FSPIISTGNH  240
FPFLPHAVIN NSQGSPSVAA PEKRA
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1124129ERRRRD
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G09530.25e-15bHLH family protein