PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHU17771.1
Organism
Capsicum chinense
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family bHLH
Protein Properties Length: 360aa    MW: 40433.5 Da    PI: 7.056
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHU17771.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH46.75.6e-1576125255
                 HHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
         HLH   2 rrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                 r++h+  E+rRR +iN++f+ Lr l+P+     ++K + a+ L ++++Y++ Lq
  PHU17771.1  76 RTKHSVTEQRRRCKINERFQALRNLIPHT----NQKRDTASFLLEVIQYVQFLQ 125
                 99**************************9....8*******************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 360 aa     Download sequence    
MLPLKIILFM HSFSYCIYIY IYSKCQTPLI VAMKRMKGHQ EEEEAEEDDA CIKKDATPSS  60
SNTKAGKNND KASALRTKHS VTEQRRRCKI NERFQALRNL IPHTNQKRDT ASFLLEVIQY  120
VQFLQDKVQK YEGSYQPWSS EPTKLMPWRN SHWHIQSLPV QPHALKNGTG PESTYLGRFD  180
ENPATVTSTM QPNQQNPIES HTSRGVSFKS MDQQNELANK SITTTIPLQS GMPMPMPNNS  240
AFSEPQPRPV SDQSSNIVDA LNHREDLAID GGTISISTPY SEGLLDSVIQ ALLCAGIDLS  300
EATISTQINF GNRANQGMTP GPPIAKDNEN PTPSGKQRMD HFREASSDED LEQAQKRLKI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G69010.17e-88bHLH family protein