PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHU17594.1
Organism
Capsicum chinense
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family bHLH
Protein Properties Length: 266aa    MW: 29714.2 Da    PI: 6.1583
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHU17594.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH25.22.8e-08157204455
                 HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
         HLH   4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                 +h+ +Er RR++iN+++  L+el+P +     k +  a +L   ++Y++sLq
  PHU17594.1 157 SHSLAERLRREKINEKLRCLQELVPGC----YKTMGMAVMLDVIINYVRSLQ 204
                 8*************************8....355888888998899988887 PP
Sequence ? help Back to Top
Protein Sequence    Length: 266 aa     Download sequence    
MINSNMELLN SISQQLEDDQ NFDSNIHQHG FLALSNDQNF SNHQQQLPIM PNFHADRMNI  60
SHDINYDPAT AAAAAQFFTL GGPSYGCTGS MNNSIPESES MLNNENNNIP TPPPLVSGNA  120
GKNKCEGRKR KRNNQKEAEK PREVVHVRAK RGQATDSHSL AERLRREKIN EKLRCLQELV  180
PGCYKTMGMA VMLDVIINYV RSLQNQIDFL SMKLSAASLF YDFNSSEMED MDSMQGTNGY  240
AAQGMGKNIV GEGYGGFPQF QTSWPL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G25330.18e-57bHLH family protein