PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHU17366.1
Organism
Capsicum chinense
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family BBR-BPC
Protein Properties Length: 292aa    MW: 32291.1 Da    PI: 10.1653
Description BBR-BPC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHU17366.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GAGA_bind347.72.6e-106102921301
   GAGA_bind   1 mdddgsrernkgyyepaaslkenlglqlmssiaerdaki...rernlalsekkaavaerd..........maflqrdkalaernkalverdnkllalll 86 
                 mdddg + rn+gyye++  l+ nlglqlmss+ +rd+k+   r +n  + + ++++++rd          +++  rd ++++        ++k+l++ +
  PHU17366.1  10 MDDDGLNMRNWGYYEQS--LRGNLGLQLMSSVVDRDTKPfltRRENPIMLGANGVFHSRDsiipeaplshIDY-VRDGWINH--------REKFLNMFP 97 
                 9*****99*******99..**********************9777888******************9999999.899***99........789999999 PP

   GAGA_bind  87 venslasalpvgvqvlsgtksidslqqlsepqledsavelreeeklealpieeaaeeakekkkkkkrqrakkpkekkakkkkkksekskkkvkkesade 185
                          +++++vl++t+  +s+q++++p+ +++             + ee +++ ke+ ++k++  +++pk++kakk kk s+++k++ +++   +
  PHU17366.1  98 --------GSPYTTVLPETSASHSMQMIQQPDATKD----------VGVNAEEPPSVRKESGHSKRKTGGATPKAPKAKKSKKASSVPKENGNPSV--Q 176
                 ........346899*************544333222..........2233455567778888888889999************9999999888888..7 PP

   GAGA_bind 186 rskaekksidlvlngvslDestlPvPvCsCtGalrqCYkWGnGGWqSaCCtttiSvyPLPvstkrrgaRiagrKmSqgafkklLekLaaeGydlsnpvD 284
                 r+k  kks+d+v+ng+++D++++P+PvCsCtGa++qCY+WG+GGWqSaCCtt+iS+yPLP+stkrrgaRiagrKmSqgafkk+LekLaaeGy+++np+D
  PHU17366.1 177 RAKPAKKSMDIVINGIDMDITGIPIPVCSCTGAPQQCYRWGCGGWQSACCTTSISMYPLPMSTKRRGARIAGRKMSQGAFKKVLEKLAAEGYNFANPID 275
                 9************************************************************************************************** PP

   GAGA_bind 285 LkdhWAkHGtnkfvtir 301
                 L++hWAkHGtnkfvtir
  PHU17366.1 276 LRTHWAKHGTNKFVTIR 292
                 ****************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 292 aa     Download sequence    
MFAFICSLLM DDDGLNMRNW GYYEQSLRGN LGLQLMSSVV DRDTKPFLTR RENPIMLGAN  60
GVFHSRDSII PEAPLSHIDY VRDGWINHRE KFLNMFPGSP YTTVLPETSA SHSMQMIQQP  120
DATKDVGVNA EEPPSVRKES GHSKRKTGGA TPKAPKAKKS KKASSVPKEN GNPSVQRAKP  180
AKKSMDIVIN GIDMDITGIP IPVCSCTGAP QQCYRWGCGG WQSACCTTSI SMYPLPMSTK  240
RRGARIAGRK MSQGAFKKVL EKLAAEGYNF ANPIDLRTHW AKHGTNKFVT IR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G14685.11e-106BBR-BPC family protein