PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PHU16820.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
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Family | NF-YB | ||||||||
Protein Properties | Length: 238aa MW: 26605.6 Da PI: 6.2203 | ||||||||
Description | NF-YB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NF-YB | 167.7 | 1.4e-52 | 64 | 158 | 1 | 95 |
NF-YB 1 vreqdrflPianvsrimkkvlPanakiskdaketvqecvsefisfvtseasdkcqrekrktingddllwalatlGfedyveplkvylkkyreleg 95 vreqdrf+Pianv+rim+k+lP +akis+d+ket+qecvsefisfvt+ea+d+cqre+rkti+++d+lwa+++lGf+dy+epl+++l++yre+++ PHU16820.1 64 VREQDRFMPIANVIRIMRKILPPHAKISDDSKETIQECVSEFISFVTGEANDRCQREQRKTITAEDVLWAMSKLGFDDYIEPLTLHLHRYRECDS 158 69******************************************************************************************875 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 238 aa Download sequence |
MDLGGGKGGG GFHGYHRFPP TTSDGKVTEM NMNLSAQLNH AIPPTNHNNN NNHASVTDDS 60 ECTVREQDRF MPIANVIRIM RKILPPHAKI SDDSKETIQE CVSEFISFVT GEANDRCQRE 120 QRKTITAEDV LWAMSKLGFD DYIEPLTLHL HRYRECDSGD RGSLRGEPLM LMKPRGVVVD 180 PAASTSINAN MIPINYPLPP NFTMAHHHHG YFTYAHMSHD NVASNSQANH DEANNVEE |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 4 | 11 | GGGKGGGG |
2 | 5 | 12 | GGGKGGGG |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G47670.2 | 1e-66 | NF-YB family protein |