PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PHU16779.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
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Family | ZF-HD | ||||||||
Protein Properties | Length: 241aa MW: 27015.2 Da PI: 7.8548 | ||||||||
Description | ZF-HD family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | ZF-HD_dimer | 105.2 | 4e-33 | 51 | 104 | 3 | 57 |
ZF-HD_dimer 3 kvrYkeClkNhAaslGghavDGCgEfmpsegeegtaaalkCaACgCHRnFHRrev 57 k +YkeClkNhA+s+GghavDGCgEf+ps ge+g++++lkCaAC+CHRnFHR+ + PHU16779.1 51 KPKYKECLKNHAVSIGGHAVDGCGEFLPS-GEDGSIDSLKCAACNCHRNFHRKIT 104 679*************************9.999*******************976 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 241 aa Download sequence |
MEYEDQQKQT EEPTPNYPTT TTKMSPSPQF QLEPVQLEPV QLWTGSSTAT KPKYKECLKN 60 HAVSIGGHAV DGCGEFLPSG EDGSIDSLKC AACNCHRNFH RKITQPPPFT AGSGGGEPGP 120 FVYYRSIPPP PPPPYGYLQY HVATHQRPLA LPSTSGGGYR EDQEDIYNPN YSGGSGAKKR 180 FRTKFSQEQK DKMQEVADKL GWRIQREDED LVQQLCNETG LTRQVFKVWM HNNKHTLGKK 240 T |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G24660.1 | 2e-62 | ZF-HD family protein |