PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHU16597.1
Organism
Capsicum chinense
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family HSF
Protein Properties Length: 128aa    MW: 14749.3 Da    PI: 5.0893
Description HSF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHU16597.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HSF_DNA-bind94.51.1e-2930103284
                   HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEES CS
  HSF_DNA-bind   2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhk 84 
                   Fl k+y ++e++++++++sw+++g++fvv+++ efa+++Lp+ Fkhsnf+SFvRQLn+YgF+kv++++         weF+++
    PHU16597.1  30 FLLKTYMLVENPATDDIVSWNSDGSAFVVWQPAEFARDLLPTLFKHSNFSSFVRQLNTYGFRKVTTSR---------WEFSND 103
                   9****************************************************************998.........555444 PP
Sequence ? help Back to Top
Protein Sequence    Length: 128 aa     Download sequence    
MEVLEEVQMS DHDKSLLDYV VMRKSSPSPF LLKTYMLVEN PATDDIVSWN SDGSAFVVWQ  60
PAEFARDLLP TLFKHSNFSS FVRQLNTYGF RKVTTSRWEF SNDXVPSQNL FYNYNNMKAY  120
TPTPGSPA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G41690.11e-43HSF family protein