PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PHU16554.1

Organism

Capsicum chinense

Taxonomic ID

80379

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum

Family

Protein Properties

Length: 601aa MW: 67334.4 Da PI: 9.0022

Description

B3 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PHU16554.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	59.6	5.6e-19	26	116	1	99
EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE-S CS B3 1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfrk 99 ffkv+ d + ++ l++p kfa++ ++ ++++ led+sgr+W v++ +k++g+ +++GW eF +++gLk+g+f+vF+++ ++f v++f + PHU16554.1 26 FFKVM--IDKSFLKVLYFPPKFARSVSHL--TDQKTYLEDSSGRRWMVRV--CKHDGSLAIKQGWPEFSSEHGLKVGEFLVFHYVPGKNF--IVQIFGT 116 89999..77777778********9765..4568***********..*****************************9865666..9999976 PP
2	B3	32	2.1e-10	520	596	15	94
-EE--HHH.HTT..---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EE CS B3 15 rlvlpkkfaeeh..ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvv 94 l lp + +h ++ k++ + + l+ ++ r W v + +s+ vlt GWk+ v a gL+ g ++F+l++ ++e+ + PHU16554.1 520 FLELPESWR-KHllKKAKQGRMIIFLRGPDKRIWPVFY--HSRSRFNVLTFGWKQVVAAYGLNPGNECLFQLVD--QRECIF 596 566777775.6668667778899999**********..999999***********************986..344445 PP

Sequence ? help Back to Top
Protein Sequence Length: 601 aa Download sequence
MERENKACDG CKNDCRLIHG KGVLSFFKVM IDKSFLKVLY FPPKFARSVS HLTDQKTYLE 60 DSSGRRWMVR VCKHDGSLAI KQGWPEFSSE HGLKVGEFLV FHYVPGKNFI VQIFGTSACE 120 KIKFCSDIGK GRKRARAYPE ATNPVELLQT TAIDSVKKKS KLSAALESEK ATYKPNIASL 180 AGNVDTDTEK GRSVHSAIHV YESFRVIDRN AQYDQTTTVG SVKKKSKLSA ALESEMVTNK 240 PNIANFAVNV DTDTEKGRSV HSAIHVDESF RVIDRNAQYD QTTAVGSVKQ KSKLSAALES 300 EKVMYKPNNA NFAVNADTDT EKGRSVHSPI HVDESFCVID RNAQYDQADD RLCLHLSSFE 360 MPAIKPLAEG ISSPLKGDNG NDNHVETNSR SQTKPNLNFE NKKLKSEALL SQLEAGITAT 420 NMVSRPAEDF PPLAEDIPPR GPKYRNSKEA FQFPREARVV KKEIEDVPTE AFFPARAIHG 480 GEYANGNQKV IKSEPADSGD APSLNAVNYS CLLEIDGRDF LELPESWRKH LLKKAKQGRM 540 IIFLRGPDKR IWPVFYHSRS RFNVLTFGWK QVVAAYGLNP GNECLFQLVD QRECIFDVRK 600 I

Sequence ? help Back to Top

Protein Sequence Length: 601 aa Download sequence

MERENKACDG CKNDCRLIHG KGVLSFFKVM IDKSFLKVLY FPPKFARSVS HLTDQKTYLE  60
DSSGRRWMVR VCKHDGSLAI KQGWPEFSSE HGLKVGEFLV FHYVPGKNFI VQIFGTSACE  120
KIKFCSDIGK GRKRARAYPE ATNPVELLQT TAIDSVKKKS KLSAALESEK ATYKPNIASL  180
AGNVDTDTEK GRSVHSAIHV YESFRVIDRN AQYDQTTTVG SVKKKSKLSA ALESEMVTNK  240
PNIANFAVNV DTDTEKGRSV HSAIHVDESF RVIDRNAQYD QTTAVGSVKQ KSKLSAALES  300
EKVMYKPNNA NFAVNADTDT EKGRSVHSPI HVDESFCVID RNAQYDQADD RLCLHLSSFE  360
MPAIKPLAEG ISSPLKGDNG NDNHVETNSR SQTKPNLNFE NKKLKSEALL SQLEAGITAT  420
NMVSRPAEDF PPLAEDIPPR GPKYRNSKEA FQFPREARVV KKEIEDVPTE AFFPARAIHG  480
GEYANGNQKV IKSEPADSGD APSLNAVNYS CLLEIDGRDF LELPESWRKH LLKKAKQGRM  540
IIFLRGPDKR IWPVFYHSRS RFNVLTFGWK QVVAAYGLNP GNECLFQLVD QRECIFDVRK  600
I

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	131	137	GRKRARA

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G53310.1	2e-10	B3 family protein