PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PHU16366.1

Organism

Capsicum chinense

Taxonomic ID

80379

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum

Family

bHLH

Protein Properties

Length: 421aa MW: 46524.1 Da PI: 7.8337

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PHU16366.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	28.5	2.7e-09	298	345	4	55
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +h+ +Er RR++i +++ L++l+P + +k Ka +L + ++Y++sLq PHU16366.1 298 SHSLAERVRREKISQRMKLLQDLVPGC----NKVTGKALMLDEIINYVQSLQ 345 8***********************9....677***************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 421 aa Download sequence
MDNDHFSNFG LHFEPKIPLN TVHSPQELNT DYFMNTHLDS NNSIDHQYAH FDSALSSVVS 60 SPIPSNSLSS NDASSLRELI GKLGSICSSP PAAFSNFTGV SCYSTPLNSP PKLLHMPIMN 120 QMGKDTPFSC FGSRSFNDRT SQFELDNEGP RYGSGTAGRG NLTRILSSPC LVQNKSSGIM 180 CEGLNLGKNS GTNEECSVSE QTQTRNVLNS RKRKAVSKLK TKNNVDGNGE NENEDGKREK 240 RAKSTQGNMG NNGIVKMEEQ KGSGDNGAEK EAKEKQKITE PPKDYIHVRA RRGQATDSHS 300 LAERVRREKI SQRMKLLQDL VPGCNKVTGK ALMLDEIINY VQSLQRQVEF LSMKLASVNP 360 RMDFHIDNLL HKEISQPNVS LHQHVLPLDG HGQNLTQLPT ICEDDLQTIV QMGLARTPTS 420 N

Sequence ? help Back to Top

Protein Sequence Length: 421 aa Download sequence

MDNDHFSNFG LHFEPKIPLN TVHSPQELNT DYFMNTHLDS NNSIDHQYAH FDSALSSVVS  60
SPIPSNSLSS NDASSLRELI GKLGSICSSP PAAFSNFTGV SCYSTPLNSP PKLLHMPIMN  120
QMGKDTPFSC FGSRSFNDRT SQFELDNEGP RYGSGTAGRG NLTRILSSPC LVQNKSSGIM  180
CEGLNLGKNS GTNEECSVSE QTQTRNVLNS RKRKAVSKLK TKNNVDGNGE NENEDGKREK  240
RAKSTQGNMG NNGIVKMEEQ KGSGDNGAEK EAKEKQKITE PPKDYIHVRA RRGQATDSHS  300
LAERVRREKI SQRMKLLQDL VPGCNKVTGK ALMLDEIINY VQSLQRQVEF LSMKLASVNP  360
RMDFHIDNLL HKEISQPNVS LHQHVLPLDG HGQNLTQLPT ICEDDLQTIV QMGLARTPTS  420
N

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G07340.1	2e-70	bHLH family protein