PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHU16116.1
Organism
Capsicum chinense
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family G2-like
Protein Properties Length: 293aa    MW: 32640.7 Da    PI: 6.446
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHU16116.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like91.57.2e-29137190155
     G2-like   1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 
                 +prl+Wtp+LH+rF+e+v++L G+++A+Pkti++lm+v gLt+e+v+SHLQkYRl
  PHU16116.1 137 RPRLVWTPQLHKRFIEVVAHL-GIKNAVPKTIMQLMNVGGLTRENVASHLQKYRL 190
                 59*******************.********************************7 PP
2Myb_DNA-binding476e-15139189148
                      TSSS-HHHHHHHHHHHHHTTTT..-HHHHHHHHT.TTS-HHHHHHHHHHHT CS
  Myb_DNA-binding   1 rgrWTteEdellvdavkqlGgg..tWktIartmg.kgRtlkqcksrwqkyl 48 
                      r+ WT++++++++++v+ lG +   +ktI++ m+  g+t++++ s++qky+
       PHU16116.1 139 RLVWTPQLHKRFIEVVAHLGIKnaVPKTIMQLMNvGGLTRENVASHLQKYR 189
                      789*******************9***************************7 PP
Sequence ? help Back to Top
Protein Sequence    Length: 293 aa     Download sequence    
MGEEVVTKLT DYDSNGVNDD RLLWEAGLPS ADDLTPLTLQ LIPSELAHAF RISPESSKTM  60
NDVNRASQNT FTSLQRWHSQ DMASMNREET VTERDETDLV RQGSDPKKLR RVESGGTDEA  120
ADADSALCSE KFETVKRPRL VWTPQLHKRF IEVVAHLGIK NAVPKTIMQL MNVGGLTREN  180
VASHLQKYRL FTKRMQSNEE PSSSPDHLCT SRGATPQSLR ESSESCHPHN TNGHMGMPTM  240
MPYQPQMMPM PMMMGMTNGG HVGMPVGYAG GPPAGFHHPY NFGYYHPVAS NDN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G46640.27e-63G2-like family protein