PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PHU16045.1

Organism

Capsicum chinense

Taxonomic ID

80379

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum

Family

TALE

Protein Properties

Length: 689aa MW: 76821.8 Da PI: 7.7944

Description

TALE family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PHU16045.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	28.7	2.2e-09	407	444	19	54
HHH..SSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHH CS Homeobox 19 Fek..nrypsaeereeLAkklgLterqVkvWFqNrRak 54 Fe ++yp+ +++ LAk++gLt +qV++WF N R + PHU16045.1 407 FEHflHPYPKDSDKIMLAKQTGLTRSQVSNWFINARVR 444 554459******************************88 PP
2	BELL	121	5.2e-39	271	342	1	72
BELL 1 erqelqkkkakLlslleeVdkrYkqyveqlqtvissFeavaglgsakpYtslAlkaiSrhFrcLkdaiaeqi 72 +rqelq+kkakL+++leeV++rY+qy++q+q+++ssFe+vag+gsak+Yt+lAl+aiS++FrcLkdaiaeqi PHU16045.1 271 QRQELQMKKAKLVTMLEEVEQRYRQYHHQMQIIVSSFEQVAGIGSAKSYTQLALHAISKQFRCLKDAIAEQI 342 69*********************************************************************8 PP

Sequence ? help Back to Top
Protein Sequence Length: 689 aa Download sequence
MYYGGTSDNN IQADQHHHAN NNIQTLYLMN PNSYMQGYNT TTDTQQQQQQ LLFLNSSPAG 60 NNALNPGNIP HAPLQHQQHF VGVPLPAVSL HDQINHHGLI QRLWNNQSGS HHHHESHQVI 120 LSSMVVSTTT DLASQLGFQR PIVVSPTPQH RQQQQGGLSL SLSPQQQQQI SFNNISSTSS 180 PRTNSVTIRG SLDGGSSNMV LGSKYLKAAQ ELLDEVVNIV GKSIKRNDHQ KKEENSMNKE 240 SMPLTSDVNT SSGTGSSRPK NEVAAELTTA QRQELQMKKA KLVTMLEEVE QRYRQYHHQM 300 QIIVSSFEQV AGIGSAKSYT QLALHAISKQ FRCLKDAIAE QIKATSKSLG EEEGIGGKIE 360 GSRLKFVDHH LRQQRALQQL GMMQPNAWRP QRGLPERAVS VLRAWLFEHF LHPYPKDSDK 420 IMLAKQTGLT RSQVSNWFIN ARVRLWKPMV EEMYLEEVKN QEQNSTTSQD DKNKENNIMV 480 SKSIAPHEEK QPITTSLLQD GTEISTSTIS TSPTVDAASL QAQHAHNFSF LGTFNMENTT 540 TNTTAVVDHM ENNAKKPRNG MQKYSPSSIL SSVDMEAKAR ESSNKGFNNP LMAAYAMGDF 600 GRFDPQEQMT ANFHGNGVSL TLGLPPSENL AMPVSQQNYL SNQNIDMGSR PEMGSHYNRM 660 GYESIDFQSG NKRFPTQLLP DFVTGNLGT

Sequence ? help Back to Top

Protein Sequence Length: 689 aa Download sequence

MYYGGTSDNN IQADQHHHAN NNIQTLYLMN PNSYMQGYNT TTDTQQQQQQ LLFLNSSPAG  60
NNALNPGNIP HAPLQHQQHF VGVPLPAVSL HDQINHHGLI QRLWNNQSGS HHHHESHQVI  120
LSSMVVSTTT DLASQLGFQR PIVVSPTPQH RQQQQGGLSL SLSPQQQQQI SFNNISSTSS  180
PRTNSVTIRG SLDGGSSNMV LGSKYLKAAQ ELLDEVVNIV GKSIKRNDHQ KKEENSMNKE  240
SMPLTSDVNT SSGTGSSRPK NEVAAELTTA QRQELQMKKA KLVTMLEEVE QRYRQYHHQM  300
QIIVSSFEQV AGIGSAKSYT QLALHAISKQ FRCLKDAIAE QIKATSKSLG EEEGIGGKIE  360
GSRLKFVDHH LRQQRALQQL GMMQPNAWRP QRGLPERAVS VLRAWLFEHF LHPYPKDSDK  420
IMLAKQTGLT RSQVSNWFIN ARVRLWKPMV EEMYLEEVKN QEQNSTTSQD DKNKENNIMV  480
SKSIAPHEEK QPITTSLLQD GTEISTSTIS TSPTVDAASL QAQHAHNFSF LGTFNMENTT  540
TNTTAVVDHM ENNAKKPRNG MQKYSPSSIL SSVDMEAKAR ESSNKGFNNP LMAAYAMGDF  600
GRFDPQEQMT ANFHGNGVSL TLGLPPSENL AMPVSQQNYL SNQNIDMGSR PEMGSHYNRM  660
GYESIDFQSG NKRFPTQLLP DFVTGNLGT

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G35940.1	1e-97	TALE family protein