PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PHU15662.1

Organism

Capsicum chinense

Taxonomic ID

80379

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum

Family

NAC

Protein Properties

Length: 657aa MW: 72234.4 Da PI: 4.6915

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PHU15662.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	162.5	1.5e-50	18	146	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp..kkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkg 97 lp G+rF+Ptdeel+++yL+ k++g + ++ vi+evdi+k+ePwdLp + v+++++ew++F++ d+ky++g+r nrat++gyWkatgkd+++ ++kg PHU15662.1 18 LPIGYRFRPTDEELINHYLCLKINGCEEKV-GVIREVDICKFEPWDLPdlSLVESNDNEWFYFCPIDRKYQNGQRLNRATERGYWKATGKDRTIATRKG 115 699**********************999.99**********96447888999************************************* PP NAM 98 elvglkktLvfykgrapkgektdWvmheyrl 128 +++g+kktLv+y grap+g++t+Wv+heyr+ PHU15662.1 116 AKIGMKKTLVYYIGRAPEGKRTNWVVHEYRA 146 ***************************96 PP

Sequence ? help Back to Top
Protein Sequence Length: 657 aa Download sequence
MAVLHEGNQL AVPPLNTLPI GYRFRPTDEE LINHYLCLKI NGCEEKVGVI REVDICKFEP 60 WDLPDLSLVE SNDNEWFYFC PIDRKYQNGQ RLNRATERGY WKATGKDRTI ATRKGAKIGM 120 KKTLVYYIGR APEGKRTNWV VHEYRATDKS LDGSHPGQGA FVLCRLFKKN ELKQDENVES 180 SHLDEVELVS SPAVGKSPID DELSEAVAPS PIMESDSSKS NPQKTSGGKT HDARLPIDSR 240 GNSCTAGDTE DPMLDITSVA PDPELEELLD IFLEHSPEPL DWKFFSPLHS PPLHSQLQVD 300 FGSSDLHGPV TNEISCDQKD AQCQNGLNAL NTNEFFNSIL VSSDEISYED PGLELRSDLF 360 ASNNINIITR EPVKDSGTSS QSKSEVTQEP VRTDLFEPEL LLGNSGETAV MREVNSVAPA 420 VEQAFATPYG CNDHSTGNLN VLKNGHPGEV FLSAGSGGMQ VHSSLNLDES NSYSNLGTDS 480 GFGIIRRTRQ MQNQPDDGQL GSGTQGSTGR RIRYQLKLQA GRIECRMPTD SDQGGANHEG 540 LLTAYESEKI STEDSSTAPA ISGDETQDTV SKESKGDGLM AEDLNGKVKD TDDFPICEDS 600 KIGAMCLFSL NFYISKVAKS ILSRFTRPRT RPGRLEKELK TWFASVVRLI AASLSAG

Sequence ? help Back to Top

Protein Sequence Length: 657 aa Download sequence

MAVLHEGNQL AVPPLNTLPI GYRFRPTDEE LINHYLCLKI NGCEEKVGVI REVDICKFEP  60
WDLPDLSLVE SNDNEWFYFC PIDRKYQNGQ RLNRATERGY WKATGKDRTI ATRKGAKIGM  120
KKTLVYYIGR APEGKRTNWV VHEYRATDKS LDGSHPGQGA FVLCRLFKKN ELKQDENVES  180
SHLDEVELVS SPAVGKSPID DELSEAVAPS PIMESDSSKS NPQKTSGGKT HDARLPIDSR  240
GNSCTAGDTE DPMLDITSVA PDPELEELLD IFLEHSPEPL DWKFFSPLHS PPLHSQLQVD  300
FGSSDLHGPV TNEISCDQKD AQCQNGLNAL NTNEFFNSIL VSSDEISYED PGLELRSDLF  360
ASNNINIITR EPVKDSGTSS QSKSEVTQEP VRTDLFEPEL LLGNSGETAV MREVNSVAPA  420
VEQAFATPYG CNDHSTGNLN VLKNGHPGEV FLSAGSGGMQ VHSSLNLDES NSYSNLGTDS  480
GFGIIRRTRQ MQNQPDDGQL GSGTQGSTGR RIRYQLKLQA GRIECRMPTD SDQGGANHEG  540
LLTAYESEKI STEDSSTAPA ISGDETQDTV SKESKGDGLM AEDLNGKVKD TDDFPICEDS  600
KIGAMCLFSL NFYISKVAKS ILSRFTRPRT RPGRLEKELK TWFASVVRLI AASLSAG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G49530.1	1e-81	NAC family protein