PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHU15620.1
Organism
Capsicum chinense
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family bHLH
Protein Properties Length: 306aa    MW: 34217.3 Da    PI: 7.6298
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHU15620.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH28.33.1e-09148195455
                 HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
         HLH   4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                 +h+ +Er RR++i +++  L+ l+P +    +k   Ka +L + ++Y++sLq
  PHU15620.1 148 SHSLAERVRREKISERMKILQALVPGC----DKVTGKALMLDEIINYVQSLQ 195
                 8*************************9....555*****************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 306 aa     Download sequence    
MEANSNSFHL DSLYLPIKMS TFLEEPDNTS LPNCISQFYQ TESNLQEFPV SMSSSHVTNK  60
SNSSSVADKR ENKEPITNSV DTKRNSEGSS SMTSAQSKNV KKGDDGIKQR KRNGNVTKEK  120
KIKEKKAPEE APTGYVHVRA RRGQATDSHS LAERVRREKI SERMKILQAL VPGCDKVTGK  180
ALMLDEIINY VQSLQNQVEF LSMKLASLNP MYYDFGMELD ALMVRPHDQS WSGLEAAVEN  240
TNISGYPLLD SSTSVSFQQF HLPNSISQGN GQVLWGVDDQ RQKMIINHSG FISNNNNNNL  300
CSFPSI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G50915.25e-51bHLH family protein