PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PHU15579.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
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Family | NF-YC | ||||||||
Protein Properties | Length: 243aa MW: 26333.5 Da PI: 5.2493 | ||||||||
Description | NF-YC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NF-YC | 179.2 | 3.8e-56 | 51 | 155 | 1 | 102 |
NF-YC 1 qlksfwekq...iekatdfknhelPlarikkilkadedvkmisaeaPvllskacelfileltlrswlhaeenkrrtlkksdiaaavtrtdifdflvdiv 96 ql++fw++q ie+a+dfknh+lPlarikki+kadedv+misaeaPvl++kacelfilelt+rswlhaeenkrrtl+k+diaaa+trtdifdflvdiv PHU15579.1 51 QLQMFWNYQrqeIEQANDFKNHQLPLARIKKIMKADEDVRMISAEAPVLFAKACELFILELTIRSWLHAEENKRRTLQKNDIAAAITRTDIFDFLVDIV 149 89*****998899************************************************************************************** PP NF-YC 97 prdelk 102 prde+k PHU15579.1 150 PRDEVK 155 ***875 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 243 aa Download sequence |
MDNNTNTHQS PTDASAAAAA AAATAAQSAS AVAAYPGQTP YHHLLQQQQQ QLQMFWNYQR 60 QEIEQANDFK NHQLPLARIK KIMKADEDVR MISAEAPVLF AKACELFILE LTIRSWLHAE 120 ENKRRTLQKN DIAAAITRTD IFDFLVDIVP RDEVKDEGVG LGLGPGIVGP TASGVPYYYP 180 PLGQPAPGGV MLGRPAVPGV DPSMYVHPPP SQAWQSVWQT SEEHSYPSGG GSSSGQGNVD 240 GQM |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 124 | 130 | RRTLQKN |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G48590.1 | 1e-96 | NF-YC family protein |