PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PHU14465.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
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Family | FAR1 | ||||||||
Protein Properties | Length: 694aa MW: 80191.1 Da PI: 6.6883 | ||||||||
Description | FAR1 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | FAR1 | 77.1 | 3.4e-24 | 73 | 164 | 1 | 90 |
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkek...dgkwevtkleleHnHela 90 ++Y+++A++ GFsvrk++s++s++ g i++r+fvC+++g+++++kk+++++ r r++ r+gC+akl ++ke ++w+v+++++ HnHel PHU14465.1 73 EYYSNFARKNGFSVRKARSTESQNLG-IYRRDFVCYRSGFNQPRKKANVEHPRDRKSVRCGCDAKLYLTKEIadgVAQWYVSQFSNIHNHELL 164 69********************8888.******************************************998766789*************96 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 694 aa Download sequence |
MEITAAKPFN NIWIRRQQCP CGDWKCYIKA DGDEQGANVS QTTKSEATSS SSQDIVFTPY 60 VGQIFKGDDE AFEYYSNFAR KNGFSVRKAR STESQNLGIY RRDFVCYRSG FNQPRKKANV 120 EHPRDRKSVR CGCDAKLYLT KEIADGVAQW YVSQFSNIHN HELLEDDQVR LLPAYRKIQE 180 ADQERILLLS KAGFPVNRIV KVLELEKGVQ PGQLPFIEKD VRNFVRTCKK TVEENDALIT 240 EKRENDLLDL LEGCKASEQK DEGFVYSFTT DENGRVENIA WSYGHSRQAY SFFGDVVTFD 300 TTYHSITYNM IFGVWFGIDN HGNVLFLGCV LLQDETSQSF TWALQSFVRF MRGRQPQTIV 360 TDIDSGLRDA IASEMPNTKH VISIWQVLSK LSSWFSLPLG LQYPDFKSEF DVLCRLENVE 420 DFEHQWNQLV ARFGLGSDKH IALLLSYRAS WPSSYMRNFF LARTMMIEYW KLVETYMKNI 480 LSPQSSLLLF FEKVGSASNV GSHKKEKQLY MPAKTCLPVE EHSRSILTPY AFNIMQHEIM 540 LSMQYAITEM ANSSYLVRHY KKMEAECLVI WIHEDEQVHC SCKEFEHSGI MCRHSIRVLV 600 SKNYFQIPEK YFPLRWRLES SLAPLDDSVI QSSKNEYSQV FHALCGSLYS ESSISKQRFD 660 YVNRELKQLL ERVQNMPSVD EVAVSSAPIN VGEL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G28530.1 | 0.0 | FAR1 family protein |