PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PHU14015.1

Organism

Capsicum chinense

Taxonomic ID

80379

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum

Family

G2-like

Protein Properties

Length: 378aa MW: 42701.2 Da PI: 9.1719

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PHU14015.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	99.1	3.1e-31	73	126	2	55
G2-like 2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 prlrWtpeLH rF +ave+LGG+++AtPk +l+lm++kgL+++hvkSHLQ+YR+ PHU14015.1 73 PRLRWTPELHLRFAHAVERLGGQDRATPKLVLQLMNIKGLSIAHVKSHLQMYRS 126 8****************************************************7 PP
2	Myb_DNA-binding	54.1	3.5e-17	74	125	1	48
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 r+rWT+e+++++++av++lGg t+k++ + m+ kg++ ++ks++q+y+ PHU14015.1 74 RLRWTPELHLRFAHAVERLGGQdraTPKLVLQLMNiKGLSIAHVKSHLQMYR 125 89************************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 378 aa Download sequence
MEGGSSSTEE SKLSPKNQIE FGEEEEEEDD LETEEKSKAQ GTTRTCSSNS TVEENGKKTN 60 SGSVRQYVRS KTPRLRWTPE LHLRFAHAVE RLGGQDRATP KLVLQLMNIK GLSIAHVKSH 120 LQMYRSKKTD DPSQTVSTDG RTLLENGDHH IFNLTQLPRL QGYNQTSSSS LRYENALWSR 180 QPNSMYNSYN VNIGGGSRTS TRHGFASHIN GYSSDGQLFP WNKPIDTEKK QNRPQFLQNQ 240 RFWPTQIGIS SAKQNLLMTL QFNRNTVETA TQFNRREQEM MTQVRANISL SSSRGKGWTS 300 EEVAGTITST SNKRKIQDSE INLDLNLSLK ATREDHDDHL KRLKAEQVGD LLSLSLYSSS 360 TNDQENNGKK ANTLDLTL

Sequence ? help Back to Top

Protein Sequence Length: 378 aa Download sequence

MEGGSSSTEE SKLSPKNQIE FGEEEEEEDD LETEEKSKAQ GTTRTCSSNS TVEENGKKTN  60
SGSVRQYVRS KTPRLRWTPE LHLRFAHAVE RLGGQDRATP KLVLQLMNIK GLSIAHVKSH  120
LQMYRSKKTD DPSQTVSTDG RTLLENGDHH IFNLTQLPRL QGYNQTSSSS LRYENALWSR  180
QPNSMYNSYN VNIGGGSRTS TRHGFASHIN GYSSDGQLFP WNKPIDTEKK QNRPQFLQNQ  240
RFWPTQIGIS SAKQNLLMTL QFNRNTVETA TQFNRREQEM MTQVRANISL SSSRGKGWTS  300
EEVAGTITST SNKRKIQDSE INLDLNLSLK ATREDHDDHL KRLKAEQVGD LLSLSLYSSS  360
TNDQENNGKK ANTLDLTL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G38300.1	3e-50	G2-like family protein