PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PHU13696.1

Organism

Capsicum chinense

Taxonomic ID

80379

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum

Family

Protein Properties

Length: 361aa MW: 40813.5 Da PI: 11.6278

Description

B3 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PHU13696.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	49.7	6.7e-16	58	137	4	87
E-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SS CS B3 4 vltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgr 87 + +++++ +++++lp fa+ +g+ ++ +++l+de+ rsW+v+l + r+ +t+GW++F +an +++gD+ F+l+g+ PHU13696.1 58 TIIKPYAIIRALVYLPSAFARPNGLMRRC--KMILRDEKQRSWSVQL--GPVGPRFGITRGWRQFREANAVQVGDTYKFELIGN 137 567888999999*********999766..7***********..99999*************************995 PP

Sequence ? help Back to Top
Protein Sequence Length: 361 aa Download sequence
MPLGRPHFIY TNSPYCLSSD HVPEGKKPNL DAKRVSSRRK EANVLASTSA NADSQFVTII 60 KPYAIIRALV YLPSAFARPN GLMRRCKMIL RDEKQRSWSV QLGPVGPRFG ITRGWRQFRE 120 ANAVQVGDTY KFELIGNGTI PVAYFCLMVS FSMMLHNVSA MVKLSEFEPW KQSLMLVLGP 180 NPLFLRGMLG PSKLMPKLVA GLIGRSFVGV PPKSEVVRTR SSRNQKYRQM DLPDRSLVTG 240 AARCLYRRSR AAGNLDRRQK HEWFERRRGT GNGREKRVER TGEREGWGWG LSLPVTGVPT 300 PSPASAGQGA VVVGLVNVRE RAKNVRERVH KKLNFNSKIP SYNVSIFFLF WRRVEGRIII 360 T

Sequence ? help Back to Top

Protein Sequence Length: 361 aa Download sequence

MPLGRPHFIY TNSPYCLSSD HVPEGKKPNL DAKRVSSRRK EANVLASTSA NADSQFVTII  60
KPYAIIRALV YLPSAFARPN GLMRRCKMIL RDEKQRSWSV QLGPVGPRFG ITRGWRQFRE  120
ANAVQVGDTY KFELIGNGTI PVAYFCLMVS FSMMLHNVSA MVKLSEFEPW KQSLMLVLGP  180
NPLFLRGMLG PSKLMPKLVA GLIGRSFVGV PPKSEVVRTR SSRNQKYRQM DLPDRSLVTG  240
AARCLYRRSR AAGNLDRRQK HEWFERRRGT GNGREKRVER TGEREGWGWG LSLPVTGVPT  300
PSPASAGQGA VVVGLVNVRE RAKNVRERVH KKLNFNSKIP SYNVSIFFLF WRRVEGRIII  360
T

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G31615.1	2e-15	B3 family protein