PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHU13666.1
Organism
Capsicum chinense
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family B3
Protein Properties Length: 311aa    MW: 36451.9 Da    PI: 6.0446
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHU13666.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B3407.1e-136663395
                -SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEE CS
          B3 33 sktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvk 95
                +++++l+d  g+ W +++  +k ++ +++  GW +F k+n L+ gDf++F + ++ ef l++ 
  PHU13666.1  6 TRKVSLRDGFGNMWPIRV--TKIGCDFYFHYGWTKFTKDNTLEFGDFLIFDYGKNGEFDLKLL 66
                5689**************..********************************98888877665 PP
2B333.48.2e-112112881190
                 HHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SS.SEE CS
          B3  11 lksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgr.sef 90 
                  +++ l++p + +++++++ ++   ++++d+ gr+++ kl++++ + r++l +GW++ ++ n ++ +D+++ +++++  ++
  PHU13666.1 211 KRKDELYVPVDVVRDYKLDIPS--SMIIRDSAGREFQTKLKIWGDG-RIWLVGGWRSLCNWNLVDKNDICICEFVREkCSK 288
                 56789***********999555..69999***********999986.899***********************99874554 PP
Sequence ? help Back to Top
Protein Sequence    Length: 311 aa     Download sequence    
MNGKLTRKVS LRDGFGNMWP IRVTKIGCDF YFHYGWTKFT KDNTLEFGDF LIFDYGKNGE  60
FDLKLLAING CEKKGDGGEK KREERNMEHQ IKIEPKMKNL SRDSSSGSSS DDSDEDYVEE  120
EVEEEEENEM EPRSKHIYKE KEEEDEEEED EDQNERVGTL MNKTPRSKVR CKRATYHKVS  180
GRHDQFGKDI FRSGRAIQPE NPYFIAKVRA KRKDELYVPV DVVRDYKLDI PSSMIIRDSA  240
GREFQTKLKI WGDGRIWLVG GWRSLCNWNL VDKNDICICE FVREKCSKGL YLQVQVLYEG  300
SSSHPNKEYK K
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G60140.12e-09B3 family protein