PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHU13169.1
Organism
Capsicum chinense
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family NAC
Protein Properties Length: 338aa    MW: 37634.3 Da    PI: 6.9257
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHU13169.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM166.68.6e-52141391128
         NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkgel 99 
                 lppGfrF Ptdeel+veyL++kv+g+ +el ++i+evd+yk++Pw Lp+k+  +ekewyfFs+rd+ky++g+r+nr++ sgyWkatg+dk v s +g+ 
  PHU13169.1  14 LPPGFRFYPTDEELLVEYLCRKVAGHIFEL-QIIAEVDLYKFDPWVLPNKAIFGEKEWYFFSPRDRKYPNGSRPNRVAGSGYWKATGTDKVVAS-EGRR 110
                 79**************************99.89***************8777899***********************************9999.9999 PP

         NAM 100 vglkktLvfykgrapkgektdWvmheyrl 128
                 vg+kk Lvfy g+apkg+kt+W+mheyrl
  PHU13169.1 111 VGIKKALVFYVGKAPKGTKTNWIMHEYRL 139
                 ***************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 338 aa     Download sequence    
MGLQEPDPLK QLNLPPGFRF YPTDEELLVE YLCRKVAGHI FELQIIAEVD LYKFDPWVLP  60
NKAIFGEKEW YFFSPRDRKY PNGSRPNRVA GSGYWKATGT DKVVASEGRR VGIKKALVFY  120
VGKAPKGTKT NWIMHEYRLC EPSRKIGSPR LDDWVLCRIY KKNVAAPKPG SCDLRNKDIS  180
HGGSSSSSSS LFGDMLEALP VIEDRYFSLP QMNFQQSDTN LSLQQFGSGN FDWAATAQSL  240
FPELATQNPA SGPPPAAPPM LVNNQNNLNN LNEFFANSTA LNFHEDVKNE GGSEQEVQSS  300
VNNPGFYPVN STGFPGTDPF GIRYPTQTQT VGAGFTTQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G27410.21e-113NAC family protein