PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PHU13156.1

Organism

Capsicum chinense

Taxonomic ID

80379

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum

Family

GeBP

Protein Properties

Length: 592aa MW: 67936.7 Da PI: 3.5097

Description

GeBP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PHU13156.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF573	35.4	3.1e-11	485	569	12	97
DUF573 12 eivlLqGlidfkaktgkspsddidafyefvkksi.sfkvsksqlveKirrLKkKfkkkvkkaksgkepsfskehdqkifelskkiWg 97 ++++L+ + +f +++g p ++ d++++ +++si ++k+ k++l+eK+ + + f++ ++ +g++p+++++ +++if+ls+++Wg PHU13156.1 485 DLAILRSIWNFYSSNGYIPDSHSDELHKHIRDSIpKLKILKQDLIEKVIAFEDNFNTVRQL--EGDNPEMEQPVNREIFDLSMRLWG 569 689*****************************558*****************999..*********************8 PP

Sequence ? help Back to Top
Protein Sequence Length: 592 aa Download sequence
MLQSHELSFI VFPRAFQKLS CAGEQVPGNG RFSSSSSTSS SPIPDPPPPQ LDENTDNQLA 60 AIDILETELQ CDESLTEIIK EVNEEEEEDK GLMSDECSTN CTGFELNECE RLCTDEEEAE 120 GQRELDGQNE NQELEQGESG DHGNQQNGNQ ESDPDEEEED GNQENNNGEE DGSQENNSEE 180 EDKNEEEKEE ETEEEKAEEA EEETAEEEGK TEESDDEGEE EEPGENQLGD PDEDRNRGQK 240 RKRTLSERNE ENGGRKRKRP LSDENQEEND DDEEEENSEN AGSENSSSGN QEAEEDEEND 300 ENQQENEEEE EDEEEEEEGE DEEDEEEEVD DDDDDEEDEE DDDDEEEEEE EEEEEEEEDG 360 EHDKNQEEND DNEEEDGDVD DEEEEVEGEE EAKEEAEGGE HDENQEENDD KEEEDGEVDD 420 DEEERRRRAA EKGKRPMSEI YQLESVEVQF SKIEEGGPSE IDVVNETELT DHELNKDEDY 480 DFHQDLAILR SIWNFYSSNG YIPDSHSDEL HKHIRDSIPK LKILKQDLIE KVIAFEDNFN 540 TVRQLEGDNP EMEQPVNREI FDLSMRLWGN TEDNAGDDDA ERQNQAAGAA DD

Sequence ? help Back to Top

Protein Sequence Length: 592 aa Download sequence

MLQSHELSFI VFPRAFQKLS CAGEQVPGNG RFSSSSSTSS SPIPDPPPPQ LDENTDNQLA  60
AIDILETELQ CDESLTEIIK EVNEEEEEDK GLMSDECSTN CTGFELNECE RLCTDEEEAE  120
GQRELDGQNE NQELEQGESG DHGNQQNGNQ ESDPDEEEED GNQENNNGEE DGSQENNSEE  180
EDKNEEEKEE ETEEEKAEEA EEETAEEEGK TEESDDEGEE EEPGENQLGD PDEDRNRGQK  240
RKRTLSERNE ENGGRKRKRP LSDENQEEND DDEEEENSEN AGSENSSSGN QEAEEDEEND  300
ENQQENEEEE EDEEEEEEGE DEEDEEEEVD DDDDDEEDEE DDDDEEEEEE EEEEEEEEDG  360
EHDKNQEEND DNEEEDGDVD DEEEEVEGEE EAKEEAEGGE HDENQEENDD KEEEDGEVDD  420
DEEERRRRAA EKGKRPMSEI YQLESVEVQF SKIEEGGPSE IDVVNETELT DHELNKDEDY  480
DFHQDLAILR SIWNFYSSNG YIPDSHSDEL HKHIRDSIPK LKILKQDLIE KVIAFEDNFN  540
TVRQLEGDNP EMEQPVNREI FDLSMRLWGN TEDNAGDDDA ERQNQAAGAA DD

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	240	259	KRKRTLSERNEENGGRKRKR
2	241	260	KRKRTLSERNEENGGRKRKR