PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PHU13152.1

Organism

Capsicum chinense

Taxonomic ID

80379

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum

Family

GeBP

Protein Properties

Length: 584aa MW: 67490.9 Da PI: 3.5102

Description

GeBP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PHU13152.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF573	34.1	7.6e-11	477	561	12	97
DUF573 12 eivlLqGlidfkaktgkspsddidafyefvkksi.sfkvsksqlveKirrLKkKfkkkvkkaksgkepsfskehdqkifelskkiWg 97 ++++L+ + +f ++g p ++ d++++ +++si ++k+ k++l+eK+ + + f++ ++ +g++p+++++ +++if+ls+++Wg PHU13152.1 477 DLAILRSIWNFYCNNGYIPDSHSDELHKHIRDSIpKLKILKQDLIEKVIAFEDNFNTVRQL--EGDNPEMEQPVNREIFDLSMRLWG 561 689*****************************558*****************999..*********************8 PP

Sequence ? help Back to Top
Protein Sequence Length: 584 aa Download sequence
MLGAGEQVPG NGGFSSSSST SSSPIPDPPP PQLNENTDNQ LAATDILETE LQCDESLTEI 60 IKEVKEEEEE DKGLMSDECS TNCTGFELNE CERLRTDEEE AERKRELDGQ NENQELEQEE 120 SGDHGNQESE PDKEEEDGNQ ENNNGGEEEN EEEGGNQENS NEEEEKEEEA EEENEEETEE 180 SDDEGEEEEP GENQSGDPDE DRNRGRKRKR ALSEQNEESD EDSNGGRQRI RNSETEEVPD 240 GGRKRKRPSS DQNQEENDDN EEEEEENSEN EGSENNESGN QESEEDEENY ENQEENEEEE 300 EDEEEQEEEE EEDEEEEVDD DDDDDDDEEE EDDDDEEEEQ EEEEEEEEAE DREHYENQEE 360 NDNNEEEDGD VDDEEEEVEE EEEAKEEADD REHDENQEEN DDKEEEDGVV DDEEEERSRR 420 AAEKGKRPMS EIYQLESVEV EFSKIEEGGP SEIHVVNQTE LTDHELNNDD DYDFHQDLAI 480 LRSIWNFYCN NGYIPDSHSD ELHKHIRDSI PKLKILKQDL IEKVIAFEDN FNTVRQLEGD 540 NPEMEQPVNR EIFDLSMRLW GNTEDNAGDD DAEQQNQAAG AADD

Sequence ? help Back to Top

Protein Sequence Length: 584 aa Download sequence

MLGAGEQVPG NGGFSSSSST SSSPIPDPPP PQLNENTDNQ LAATDILETE LQCDESLTEI  60
IKEVKEEEEE DKGLMSDECS TNCTGFELNE CERLRTDEEE AERKRELDGQ NENQELEQEE  120
SGDHGNQESE PDKEEEDGNQ ENNNGGEEEN EEEGGNQENS NEEEEKEEEA EEENEEETEE  180
SDDEGEEEEP GENQSGDPDE DRNRGRKRKR ALSEQNEESD EDSNGGRQRI RNSETEEVPD  240
GGRKRKRPSS DQNQEENDDN EEEEEENSEN EGSENNESGN QESEEDEENY ENQEENEEEE  300
EDEEEQEEEE EEDEEEEVDD DDDDDDDEEE EDDDDEEEEQ EEEEEEEEAE DREHYENQEE  360
NDNNEEEDGD VDDEEEEVEE EEEAKEEADD REHDENQEEN DDKEEEDGVV DDEEEERSRR  420
AAEKGKRPMS EIYQLESVEV EFSKIEEGGP SEIHVVNQTE LTDHELNNDD DYDFHQDLAI  480
LRSIWNFYCN NGYIPDSHSD ELHKHIRDSI PKLKILKQDL IEKVIAFEDN FNTVRQLEGD  540
NPEMEQPVNR EIFDLSMRLW GNTEDNAGDD DAEQQNQAAG AADD

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	205	211	GRKRKRA