PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PHU13137.1

Organism

Capsicum chinense

Taxonomic ID

80379

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum

Family

C2H2

Protein Properties

Length: 433aa MW: 46998.9 Da PI: 9.3996

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PHU13137.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	14.6	9.5e-05	200	222	2	23
EETTTTEEESSHHHHHHHHHH.T CS zf-C2H2 2 kCpdCgksFsrksnLkrHirt.H 23 +C++Cg+ F ++ L+ H + H PHU13137.1 200 TCHKCGEQFGKWEALEEHHLSkH 222 7*****************99877 PP

Sequence ? help Back to Top
Protein Sequence Length: 433 aa Download sequence
MGEKKNMPTV WFSLKKTLHC KSDQSDVHDP KTRKQLSAIL TKKGGGGGRS GCSRSIANLK 60 DVIHGSKRHL DKPPSCSPRS IGSSEFLNPI THEVILSNSR CELKITSFNG FQESANGGVG 120 VGGGITNGGS TFVGTLRPGT PGPGGHPTMH YFNSGCRNTV ATPTRRSASF LVDKEGHGSF 180 PCKPTRHSLD NDVNGTSGVT CHKCGEQFGK WEALEEHHLS KHAVSELLEG DSSRKIVEII 240 CRSSWLKSES QVGRIERVLK VHNTQKTLAR FEEYREMVKS KASKLPKKHP RCIADGNELL 300 RFYGTTLACG LGMNGSCSLC ISDKCCVCRI IRNGFSTKKE LKGGIGVFTT STSGSAYECI 360 EMSKEDPSLR KALIVCRVVA GRVHRPLENI QEMAGQTGFD SLAGKVGVYS NIEELYLLNP 420 KALLPCFVVI CKA

Sequence ? help Back to Top

Protein Sequence Length: 433 aa Download sequence

MGEKKNMPTV WFSLKKTLHC KSDQSDVHDP KTRKQLSAIL TKKGGGGGRS GCSRSIANLK  60
DVIHGSKRHL DKPPSCSPRS IGSSEFLNPI THEVILSNSR CELKITSFNG FQESANGGVG  120
VGGGITNGGS TFVGTLRPGT PGPGGHPTMH YFNSGCRNTV ATPTRRSASF LVDKEGHGSF  180
PCKPTRHSLD NDVNGTSGVT CHKCGEQFGK WEALEEHHLS KHAVSELLEG DSSRKIVEII  240
CRSSWLKSES QVGRIERVLK VHNTQKTLAR FEEYREMVKS KASKLPKKHP RCIADGNELL  300
RFYGTTLACG LGMNGSCSLC ISDKCCVCRI IRNGFSTKKE LKGGIGVFTT STSGSAYECI  360
EMSKEDPSLR KALIVCRVVA GRVHRPLENI QEMAGQTGFD SLAGKVGVYS NIEELYLLNP  420
KALLPCFVVI CKA

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G27240.1	1e-128	C2H2 family protein