PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PHU12734.1

Organism

Capsicum chinense

Taxonomic ID

80379

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum

Family

bHLH

Protein Properties

Length: 424aa MW: 47845 Da PI: 4.94

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PHU12734.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	25.9	1.8e-08	266	311	7	54
HHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHH CS HLH 7 erErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksL 54 +Er+RR+++ + +++Lr l+P+ +K ++ Le+ v+Y+k+L PHU12734.1 266 DVERQRRRDMAKLYQRLRLLIPSkY---LMGKRAISDHLEEIVDYVKDL 311 69*******************77...999**************99 PP

Sequence ? help Back to Top
Protein Sequence Length: 424 aa Download sequence
MDDFEFDFDQ LDQLLNFLSP PTLQEQNSSI SLQTQSCNDI DSHQKNKSIT TTITTTTIFD 60 DDQLLNFLSS PPPSPRPPLT STLQKEDDSS ISLQTQSLND LDSHQKNEPI ITTTATTIFN 120 DDQLLNFLSP LPPSAPPPLT STLQRKDDSS ISFQTQSLND LDSHQKYEPI ITTTATTIFN 180 DDQLLNFLSP LPPSAPPPLT STLQRKDDSS ISFQTQSSND LDSHQKDEPI STTTTIVDDY 240 QVQDPMKEKE VEGKKKKKKK NVLRRDVERQ RRRDMAKLYQ RLRLLIPSKY LMGKRAISDH 300 LEEIVDYVKD LRRDIEDLER KREGLKEKKN IIAPSSSSYS MKLSDDEDRI VVKYSCNEVE 360 ISVKGGISLS KLVKVVMKEG LIVNSCVSSM VDQSLLHIIQ SKVNIGGDID LAMLRSKLLT 420 LSSP

Sequence ? help Back to Top

Protein Sequence Length: 424 aa Download sequence

MDDFEFDFDQ LDQLLNFLSP PTLQEQNSSI SLQTQSCNDI DSHQKNKSIT TTITTTTIFD  60
DDQLLNFLSS PPPSPRPPLT STLQKEDDSS ISLQTQSLND LDSHQKNEPI ITTTATTIFN  120
DDQLLNFLSP LPPSAPPPLT STLQRKDDSS ISFQTQSLND LDSHQKYEPI ITTTATTIFN  180
DDQLLNFLSP LPPSAPPPLT STLQRKDDSS ISFQTQSSND LDSHQKDEPI STTTTIVDDY  240
QVQDPMKEKE VEGKKKKKKK NVLRRDVERQ RRRDMAKLYQ RLRLLIPSKY LMGKRAISDH  300
LEEIVDYVKD LRRDIEDLER KREGLKEKKN IIAPSSSSYS MKLSDDEDRI VVKYSCNEVE  360
ISVKGGISLS KLVKVVMKEG LIVNSCVSSM VDQSLLHIIQ SKVNIGGDID LAMLRSKLLT  420
LSSP

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	254	260	KKKKKKK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G12540.1	3e-09	bHLH family protein