PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHU12732.1
Organism
Capsicum chinense
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family bHLH
Protein Properties Length: 264aa    MW: 30073.4 Da    PI: 9.8759
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHU12732.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH31.43.4e-1099145654
                 HHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHH CS
         HLH   6 nerErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksL 54 
                   +Er+RR+++ + +++Lr l+P+       +K s ++ Le+ v+Y+k+L
  PHU12732.1  99 RDVERQRRRDMAKLYQRLRLLIPSkY---LMGKRSISDHLEQIVDYVKDL 145
                 679*********************77...9******************99 PP
Sequence ? help Back to Top
Protein Sequence    Length: 264 aa     Download sequence    
MDDAEFDFGQ LDQLFNFLSS LPPPPTPPTT FQNQDSSISL QTQNSNHVPK KKPIVTNHHH  60
HHVIKKKPIK ISNINNDDQV QNPPKEKEKI AEKKKVIRRD VERQRRRDMA KLYQRLRLLI  120
PSKYLMGKRS ISDHLEQIVD YVKDLRKDIE DLERKRETLK QLKSTICSSQ LAPSSSSMKL  180
NEPLNDDDDD RINVKSCNEG VEISIKGGLS LSNVLKVLMK EGFIVSSSVS STVNQELIHI  240
IQTKVNTSGD TDLATLRSKL MSLS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G51790.13e-20bHLH family protein