PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHU12655.1
Organism
Capsicum chinense
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family NAC
Protein Properties Length: 262aa    MW: 29230.7 Da    PI: 9.6825
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHU12655.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM105.85.6e-3327754128
         NAM  54 eekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk.kgelvglkktLvfykgrapkgektdWvmheyrl 128
                 +ekewyfFs rd+ky+tg r+nrat++gyWkatgkd+e++s+ + +lvg+kktLvfy+grapkgek++Wvmheyrl
  PHU12655.1   2 GEKEWYFFSLRDRKYPTGLRTNRATEAGYWKATGKDREIFSSkTCALVGMKKTLVFYRGRAPKGEKSNWVMHEYRL 77 
                 579*************************************9745567***************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 262 aa     Download sequence    
MGEKEWYFFS LRDRKYPTGL RTNRATEAGY WKATGKDREI FSSKTCALVG MKKTLVFYRG  60
RAPKGEKSNW VMHEYRLDGK FAYHYISRSS KDEWVISRVF QKSATAITGT ATSNGGKKRP  120
SSSINNMYQE VSSPSSVSHL PPLLDSSPYS TTATSSSVIS ARDHSFKKEH VSCFSTTATN  180
SATIDPHSVF DISNTLHALP FTHYGRNSTF PSLTSLHENL QLPLFSGGAS AMHGGFSNSI  240
GNWSVPETQK VEQSELDCMW TY
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G53950.14e-75NAC family protein