PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PHU12453.1

Organism

Capsicum chinense

Taxonomic ID

80379

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum

Family

bHLH

Protein Properties

Length: 249aa MW: 27356 Da PI: 7.5051

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PHU12453.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	40.5	4.8e-13	56	102	3	54
HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 ++h+e+ErrRR+riN + +Lr l+P K++Ka+ L k++ +Ik+L PHU12453.1 56 KNHSEAERRRRERINGHLGTLRNLIPGT-----NKMDKAALLAKVIGHIKEL 102 58***********************6.....5**************99 PP

Sequence ? help Back to Top
Protein Sequence Length: 249 aa Download sequence
MDFFNSFNGV YEDYGGFGGS SSSSLILDNE SGELVKALVK PGQKGVNPEK ALIALKNHSE 60 AERRRRERIN GHLGTLRNLI PGTNKMDKAA LLAKVIGHIK ELRMNAAEVT KGVLVPTDID 120 EVKVEQQAEG SDGATYSVKA SLCCDYKHEL ISDLRQALDT LPLKTLRAEI ATLGSRMISV 180 FVITEGNEGN IEDIERCQLL VTSVRQALRS VLDKFYASEE FSSRSTLSSK RRRISLLNSS 240 SSSSVGDFW

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	62	67	ERRRRE
2	230	234	KRRRI

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G68810.1	1e-31	bHLH family protein