PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PHU12432.1

Organism

Capsicum chinense

Taxonomic ID

80379

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum

Family

HB-other

Protein Properties

Length: 1762aa MW: 198770 Da PI: 5.4127

Description

HB-other family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PHU12432.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	56.5	4.6e-18	39	93	3	57
--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHHC CS Homeobox 3 kRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakekk 57 kR t++qle+Le+ ++ + yps++ r+eL+ klgL++rq ++WF+ rR k++k PHU12432.1 39 KRKMKTASQLEILEKTYATDTYPSEALRAELSVKLGLSDRQLQMWFCHRRLKDRK 93 89999************************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 1762 aa Download sequence
MESAAAAVPM AVATASDGVG ASDDVEKKKP PEGGEPKVKR KMKTASQLEI LEKTYATDTY 60 PSEALRAELS VKLGLSDRQL QMWFCHRRLK DRKATPVKRQ KKEEASPAAV VSSGGQVDEM 120 AAVSGEIGKE HASGSGLRVQ QQHHQRVVHR PGTAVPRFRA EMPALKRYYE PPQAISELRA 180 IAFVEAQLGE PLREDGPILG MEFDPLPPGA FGAPIVADTQ HKPAGRPFEA QIYERQDVNS 240 IKGTTRTLRE YQFLPEQPSN RSNSYEQSIP SHYYSSTEVQ STRTMLSTGR HGSEQVASGY 300 SIPGQIPTLN LLPPGRQGHI SPASAEAEAA PQRSLVNIEV EANYSGQPMM KLESPFMSSD 360 KRIIHDEERL ERKRKSEEAR IAREVDAHEK RIRKELEKQD MLRRKREEQM RKDMERQDRE 420 RRKEEERLVR EKQREEERYQ REQRREMERR EKFLQKEYMK AERMRLKEEM RREKEVARLK 480 AANVRATARR IAKESTELID DERLELMELA ASKKGLPSTL SLDTETLQNL EALRDMLNEF 540 PPESVCLRRP FGVEPWICSE EDVGNLLMVW RFLITFTDVL HLWPFTLDEF VQAFHDYEPR 600 LLAEMHIALL KLIIKDIEDV ARTPAGAAAA NPNSGANPGG GHPDIVEGAY AWGFDIRSWQ 660 SHLNSLTWPE ILRQFALSAG FGPQLKKSSV EPAYPRDENE CKNGADIISN LRSGVAAQKA 720 VVKMQERGFS NLRRSRHRLT PGTVKFAAFH VLSLEGSQGL NILEVAEKIQ KSGLRDLTTS 780 KTPEASISAA LSRDTKLFER TAPSTYCVRD PYRKDPVDAD AILSAAREKI RLFKNEYVNG 840 EEAEDVEKEV ERDDESESDA ADDPEVDDLV SELKFAETPE SHKTGRTDGK NSSFDLTRTP 900 EDLSMQNSTG IMHSQSFRES KPVGTSGDQS TAGDVDASNL NQENAVIDES NAGQKWVQGL 960 MEGEYSDLTV EERLHALVAL IGVANEGNSV RLVLEERLEA ASALKKQIWA EAQLDKRRFK 1020 EEFLLKVQYP SIRNNGEQFG SVTSVEARQS PLLAVGGHNG VADILSLQQE AMHKLPDEPI 1080 NPSNAAVEKT CPMQEIYGGQ DNSQLQHFAC VAEKSRSQLK AYIGYRAEET FVYRSLPLGQ 1140 DRRRNRYWQF VTSPSRYDRG SGRIFVELCD GRWRLIDSEK DFNALMASLD IRGLRESHLH 1200 SMLQNIEATF KETARKHKYT DEKLGNSVKE DTSERVPSND CCSNTDSLKS TTCISNRETR 1260 EPSTSFLIGF GRNKMENTNA LRRYADLEKW MWEECVDSQF LCARKYGRMR SENLIGICNN 1320 CHDTYFWEDK HCPSCHRTFS PVKSSYFIEH VAQCKEKLED LFLPLCILDS LPALRVRLLR 1380 AQLASVEACI PPEALQPVWS EVYRRSWGSK LHIASTAGDL LQILTLLEGA IKGEYLISDY 1440 ETTSELLGAV SNSNLDGMAV LPWVPHTTSA VALRLMELDS SLCYTQQQKA DSLKDDKPTD 1500 FIIKTNYDEV KRVAGVVSVE GREYEKLEPD FSVKVGGRHA NSAQGRNRVR GGTHCRIRGG 1560 KSQRKVNASR SESAQRSSMK NNDRLDHLLA WKGRDGGKGR RKKGRRSVRN RQKPVKNVEE 1620 VTVEEVPLSN QQDWNEVEDG ETPQFEAPDN DSDSGTSGNE DYKGQVTIVD YEDLMVDDYG 1680 SFTGRTDHAS ASVSYSIGRP YTEIAEGGDG VGDYEDDRDE EDDENVQGYF DGEFEEEGNR 1740 FGDEEYVETP NKDSESSSEY SD

Sequence ? help Back to Top

Protein Sequence Length: 1762 aa Download sequence

MESAAAAVPM AVATASDGVG ASDDVEKKKP PEGGEPKVKR KMKTASQLEI LEKTYATDTY  60
PSEALRAELS VKLGLSDRQL QMWFCHRRLK DRKATPVKRQ KKEEASPAAV VSSGGQVDEM  120
AAVSGEIGKE HASGSGLRVQ QQHHQRVVHR PGTAVPRFRA EMPALKRYYE PPQAISELRA  180
IAFVEAQLGE PLREDGPILG MEFDPLPPGA FGAPIVADTQ HKPAGRPFEA QIYERQDVNS  240
IKGTTRTLRE YQFLPEQPSN RSNSYEQSIP SHYYSSTEVQ STRTMLSTGR HGSEQVASGY  300
SIPGQIPTLN LLPPGRQGHI SPASAEAEAA PQRSLVNIEV EANYSGQPMM KLESPFMSSD  360
KRIIHDEERL ERKRKSEEAR IAREVDAHEK RIRKELEKQD MLRRKREEQM RKDMERQDRE  420
RRKEEERLVR EKQREEERYQ REQRREMERR EKFLQKEYMK AERMRLKEEM RREKEVARLK  480
AANVRATARR IAKESTELID DERLELMELA ASKKGLPSTL SLDTETLQNL EALRDMLNEF  540
PPESVCLRRP FGVEPWICSE EDVGNLLMVW RFLITFTDVL HLWPFTLDEF VQAFHDYEPR  600
LLAEMHIALL KLIIKDIEDV ARTPAGAAAA NPNSGANPGG GHPDIVEGAY AWGFDIRSWQ  660
SHLNSLTWPE ILRQFALSAG FGPQLKKSSV EPAYPRDENE CKNGADIISN LRSGVAAQKA  720
VVKMQERGFS NLRRSRHRLT PGTVKFAAFH VLSLEGSQGL NILEVAEKIQ KSGLRDLTTS  780
KTPEASISAA LSRDTKLFER TAPSTYCVRD PYRKDPVDAD AILSAAREKI RLFKNEYVNG  840
EEAEDVEKEV ERDDESESDA ADDPEVDDLV SELKFAETPE SHKTGRTDGK NSSFDLTRTP  900
EDLSMQNSTG IMHSQSFRES KPVGTSGDQS TAGDVDASNL NQENAVIDES NAGQKWVQGL  960
MEGEYSDLTV EERLHALVAL IGVANEGNSV RLVLEERLEA ASALKKQIWA EAQLDKRRFK  1020
EEFLLKVQYP SIRNNGEQFG SVTSVEARQS PLLAVGGHNG VADILSLQQE AMHKLPDEPI  1080
NPSNAAVEKT CPMQEIYGGQ DNSQLQHFAC VAEKSRSQLK AYIGYRAEET FVYRSLPLGQ  1140
DRRRNRYWQF VTSPSRYDRG SGRIFVELCD GRWRLIDSEK DFNALMASLD IRGLRESHLH  1200
SMLQNIEATF KETARKHKYT DEKLGNSVKE DTSERVPSND CCSNTDSLKS TTCISNRETR  1260
EPSTSFLIGF GRNKMENTNA LRRYADLEKW MWEECVDSQF LCARKYGRMR SENLIGICNN  1320
CHDTYFWEDK HCPSCHRTFS PVKSSYFIEH VAQCKEKLED LFLPLCILDS LPALRVRLLR  1380
AQLASVEACI PPEALQPVWS EVYRRSWGSK LHIASTAGDL LQILTLLEGA IKGEYLISDY  1440
ETTSELLGAV SNSNLDGMAV LPWVPHTTSA VALRLMELDS SLCYTQQQKA DSLKDDKPTD  1500
FIIKTNYDEV KRVAGVVSVE GREYEKLEPD FSVKVGGRHA NSAQGRNRVR GGTHCRIRGG  1560
KSQRKVNASR SESAQRSSMK NNDRLDHLLA WKGRDGGKGR RKKGRRSVRN RQKPVKNVEE  1620
VTVEEVPLSN QQDWNEVEDG ETPQFEAPDN DSDSGTSGNE DYKGQVTIVD YEDLMVDDYG  1680
SFTGRTDHAS ASVSYSIGRP YTEIAEGGDG VGDYEDDRDE EDDENVQGYF DGEFEEEGNR  1740
FGDEEYVETP NKDSESSSEY SD

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	28	41	KKPPEGGEPKVKRK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G44180.1	0.0	HB-other family protein