PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PHU12408.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
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Family | SBP | ||||||||
Protein Properties | Length: 102aa MW: 11609.2 Da PI: 9.358 | ||||||||
Description | SBP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SBP | 81.3 | 1.4e-25 | 44 | 94 | 2 | 52 |
-SSTT-----TT--HHHHHTT--HHHHT-S-EEETTEEEEE-TTTSSEEET CS SBP 2 CqvegCeadlseakeyhrrhkvCevhskapvvlvsgleqrfCqqCsrfhel 52 Cq+e+C++dls+ak+yh+rhkvCe h+k++vv+v+gl qrfCqqCsrf +l PHU12408.1 44 CQAEKCSVDLSDAKQYHKRHKVCENHAKSQVVVVAGLPQRFCQQCSRFDHL 94 ************************************************665 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 102 aa Download sequence |
METTNNQLKS MEKNDDMLSI IEDAKKKNKK GSPNSSSSSL TRSCQAEKCS VDLSDAKQYH 60 KRHKVCENHA KSQVVVVAGL PQRFCQQCSR FDHLLYLFFS KP |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G02065.1 | 7e-22 | SBP family protein |