PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHU11894.1
Organism
Capsicum chinense
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family B3
Protein Properties Length: 278aa    MW: 31519.2 Da    PI: 9.1513
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHU11894.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B350.24.5e-1637125198
                 EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTE.EEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE- CS
          B3   1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgr.yvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfr 98 
                 ffkv+     + s  l++p  f+ e +g+k e+  +t   +   +W+v++   +++++ +++ kGW+eFv+ ++L+ gDf vF++ g+++f   v++++
  PHU11894.1  37 FFKVM--VPGFHS-KLTIPLAFCLELKGDKSEKGSIT---KGKDTWNVEI--GRSKKGiIWFDKGWEEFVQNHNLRIGDFAVFEHLGNMNF--SVTLLD 125
                 77888..445555.59**********88877766676...7889******..6666667***************************99999..777665 PP
2B351.12.4e-161922661589
                 -EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTE..EEE-TTHHHHHHHHT--TT-EEEEEE-SSSE CS
          B3  15 rlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgr..yvltkGWkeFvkangLkegDfvvFkldgrse 89 
                  + +p +f++++ +   +++t++l+ +sg+s  v l++++++++    +t+GW +F ++n+L++gD+++F+ld+ ++
  PHU11894.1 192 YMHIPTEFCQSNALF--QNTTIMLTGPSGKSCPVSLRICNGGKTlyACITRGWHDFFSSNKLNVGDVCIFQLDSAKS 266
                 589*********877..6679***************9999988888889**********************997644 PP
Sequence ? help Back to Top
Protein Sequence    Length: 278 aa     Download sequence    
KQTIFHLYSD CDYSETRRRI RSYSLTMSSS CPISRRFFKV MVPGFHSKLT IPLAFCLELK  60
GDKSEKGSIT KGKDTWNVEI GRSKKGIIWF DKGWEEFVQN HNLRIGDFAV FEHLGNMNFS  120
VTLLDSTGCD KKLLMLENAE QVPSQGKNVK SAQCGIEKRK LEGDQPHYQC MKGSSEFMAR  180
IKEYNVRKRS PYMHIPTEFC QSNALFQNTT IMLTGPSGKS CPVSLRICNG GKTLYACITR  240
GWHDFFSSNK LNVGDVCIFQ LDSAKSDSNS ISIDVRVV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G00260.11e-22B3 family protein