PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PHU11552.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
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Family | FAR1 | ||||||||
Protein Properties | Length: 239aa MW: 27598.5 Da PI: 4.7822 | ||||||||
Description | FAR1 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | FAR1 | 28.2 | 6.2e-09 | 108 | 148 | 51 | 91 |
FAR1 51 errtraetrtgCkaklkvkkekdgkwevtkleleHnHelap 91 + +++++r++Cka+++ + ++dg v+k+ leHnHel p PHU11552.1 108 VEARNQSKRVDCKARVNYHVMNDGSCIVAKVILEHNHELEP 148 456899********************************975 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 239 aa Download sequence |
MDHNYSNNLL RAILNDVLGW EGSDILHGNE HSYGGYADGP DRYLDTDDED LQNLTDEEMN 60 RSHQLFQDED LNIFNSEEDL YGEDGVVEEE GPMHDNSYTD EQYTVGPVEA RNQSKRVDCK 120 ARVNYHVMND GSCIVAKVIL EHNHELEPAL LHFLPCHRKL SRTLKRSLTA HDITGLRPSK 180 SIRLLEVEVG GPERMTCTPK DYRNYILQQR RLRTLSSDTA ALHRFFVDMQ SKNEIFFTQ |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G38180.1 | 5e-11 | FAR1 family protein |