PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHU11384.1
Organism
Capsicum chinense
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family MYB
Protein Properties Length: 277aa    MW: 32113.2 Da    PI: 10.0814
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHU11384.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding56.75.3e-1875122148
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 
                      rg W +eEd++l+++v+ +G g+W+tI+++ g+ R++k+c++rw +yl
       PHU11384.1  75 RGFWKPEEDLILKNCVETHGEGNWATISEKSGLLRSGKSCRLRWKNYL 122
                      799*****************************99************97 PP
2Myb_DNA-binding49.31.2e-15128173148
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 
                      rg ++++E +l+++++k+lG++ W++Ia +++ gRt++++k++w+++l
       PHU11384.1 128 RGMMSEDEKDLIIRLHKLLGNR-WSLIAGRLP-GRTDNEVKNFWNTHL 173
                      6789******************.*********.************996 PP
Sequence ? help Back to Top
Protein Sequence    Length: 277 aa     Download sequence    
MKVTEMRMLG WICGLTKKDS VINETIRDKV GVTSVKEKMQ ELRLRRFEHV MKRLTAERKS  60
KSAMKDKEVK TRMKRGFWKP EEDLILKNCV ETHGEGNWAT ISEKSGLLRS GKSCRLRWKN  120
YLRPNIKRGM MSEDEKDLII RLHKLLGNRW SLIAGRLPGR TDNEVKNFWN THLYNKRSCK  180
GKKKHVKSKE ANTHSPQGKT QECPADTVSN QEVATKTVLD SWIEEMQDFN CSLLSPVMNS  240
MPFLEDEPFI PILDDIVLLE AFTSSGKEAW SEIQPFL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G52600.14e-61MYB family protein