PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PHU11214.1

Organism

Capsicum chinense

Taxonomic ID

80379

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum

Family

Protein Properties

Length: 562aa MW: 62632 Da PI: 4.8122

Description

B3 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PHU11214.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	60.1	3.9e-19	125	225	1	98
EEEE-..-HHHHTT-EE--HHH.HTT......---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..E CS B3 1 ffkvltpsdvlksgrlvlpkkfaeeh......ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelv 93 f+k lt sd +++ l++ ++ a ++ ++k+ ++l+ +d++g +W++++ ++++++r++ltkGW +Fv +++L +gD+v+F + +++ l+ PHU11214.1 125 FCKNLTASDINSNWGLTVRRDDAIKCfppldiTKEKPI-QELIATDLHGFEWQFTHVFQGQPRRHLLTKGWGKFVASKRLVVGDSVIFL--RGENGGLR 220 89**************************87434444.389********************************************..3477779 PP EEEE- CS B3 94 vkvfr 98 v+++r PHU11214.1 221 VGIRR 225 *9997 PP

Sequence ? help Back to Top
Protein Sequence Length: 562 aa Download sequence
MDAITGSSHQ QQQQNHVLFQ GDNLYSELWK ACAGPMMDLP RPGERVFYFP MMHVELLKES 60 ADQIVPSFHL PSRILCRVIN IQLKVEPETD EVYTQITSLP EENQNDQTIP DALSPEPPTL 120 QFHSFCKNLT ASDINSNWGL TVRRDDAIKC FPPLDITKEK PIQELIATDL HGFEWQFTHV 180 FQGQPRRHLL TKGWGKFVAS KRLVVGDSVI FLRGENGGLR VGIRRCAHPS HNIGSSPVSS 240 QTVEGVLSVV SHAFAAGTLF SVYCQPRMSG CFLSLNKYLE QNKQNISNEN SAPVTSNGLC 300 TNQVSVNDLD CDVFSDIFLA PDSHFMKSTL QSNENDAGVP CTVQSFEEWP EIEIESLLTY 360 SLQLIPELST TTSTLMQPTD ALQMTCTYST TSQLSTEGSG CGGEVISWAG YQVAQQYVPI 420 LNRVIQRYPS TISSFKAITG DLQSAYLEML AKLVNLLEQS TIGNMDSRDQ SQVVEQYLAD 480 LKFIGIDISW IETRLGQVGE VLKKEKLIQY QHALAQRIEE TQCILGKLHV ELDSVKKEVD 540 ELTPKVGPNP PSKDCSILEG LL

Sequence ? help Back to Top

Protein Sequence Length: 562 aa Download sequence

MDAITGSSHQ QQQQNHVLFQ GDNLYSELWK ACAGPMMDLP RPGERVFYFP MMHVELLKES  60
ADQIVPSFHL PSRILCRVIN IQLKVEPETD EVYTQITSLP EENQNDQTIP DALSPEPPTL  120
QFHSFCKNLT ASDINSNWGL TVRRDDAIKC FPPLDITKEK PIQELIATDL HGFEWQFTHV  180
FQGQPRRHLL TKGWGKFVAS KRLVVGDSVI FLRGENGGLR VGIRRCAHPS HNIGSSPVSS  240
QTVEGVLSVV SHAFAAGTLF SVYCQPRMSG CFLSLNKYLE QNKQNISNEN SAPVTSNGLC  300
TNQVSVNDLD CDVFSDIFLA PDSHFMKSTL QSNENDAGVP CTVQSFEEWP EIEIESLLTY  360
SLQLIPELST TTSTLMQPTD ALQMTCTYST TSQLSTEGSG CGGEVISWAG YQVAQQYVPI  420
LNRVIQRYPS TISSFKAITG DLQSAYLEML AKLVNLLEQS TIGNMDSRDQ SQVVEQYLAD  480
LKFIGIDISW IETRLGQVGE VLKKEKLIQY QHALAQRIEE TQCILGKLHV ELDSVKKEVD  540
ELTPKVGPNP PSKDCSILEG LL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G59750.4	9e-97	ARF family protein