PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PHU11201.1

Organism

Capsicum chinense

Taxonomic ID

80379

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum

Family

ARR-B

Protein Properties

Length: 672aa MW: 73983.7 Da PI: 7.0534

Description

ARR-B family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PHU11201.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	76.4	3.8e-24	205	259	2	55
G2-like 2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQ..kYRl 55 +r++W+ eLH++Fv av qL G+ekA+Pk+il+lm+v+ Lt+e+v+SHLQ kYRl PHU11201.1 205 ARVVWSIELHRKFVAAVGQL-GIEKAVPKRILDLMNVDRLTRENVASHLQalKYRL 259 79****************.***************************888997 PP
2	Myb_DNA-binding	27.3	8.6e-09	206	255	1	47
TSSS-HHHHHHHHHHHHHTTTT..-HHHHHHHHT.TTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg..tWktIartmg.kgRtlkqcksrwqky 47 r W+ e++ ++v av qlG + +k+I m+ ++t++++ s++q + PHU11201.1 206 RVVWSIELHRKFVAAVGQLGIEkaVPKRILDLMNvDRLTRENVASHLQAL 255 678********************************************976 PP
3	Response_reg	81.4	2.9e-27	22	130	1	109
EEEESSSHHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHH..ESEEEEESSCTTSEHHHHHHHHHHHTTTSEEEEEESTTTHHHHHHHHHTTES CS Response_reg 1 vlivdDeplvrellrqalekegyeevaeaddgeealellkekd..pDlillDiempgmdGlellkeireeepklpiivvtahgeeedalealkaGak 95 vl vdD+p+ +++l ++l+k +y +v+++++++ al++l+e++ +Dl++ D+ mp+mdG++ll+ e++lp+i+++a++e ++ + ++ Ga PHU11201.1 22 VLAVDDDPICLKVLDSLLRKCQY-QVTTTSQARVALKMLRENKdrFDLVISDVHMPDMDGFKLLELVGL-EMDLPVIMLSANSETRLVMKGISHGAC 116 799******************.***********888889***************87754.558******************** PP EEEESS--HHHHHH CS Response_reg 96 dflsKpfdpeelvk 109 d+l+Kp+ +eel++ PHU11201.1 117 DYLVKPIRIEELRN 130 **********97 PP

Sequence ? help Back to Top
Protein Sequence Length: 672 aa Download sequence
MTVEEIRGNM GGGDNFPIGM RVLAVDDDPI CLKVLDSLLR KCQYQVTTTS QARVALKMLR 60 ENKDRFDLVI SDVHMPDMDG FKLLELVGLE MDLPVIMLSA NSETRLVMKG ISHGACDYLV 120 KPIRIEELRN IWQHVIRRKK VEPKTQSKSN NHVKSNHESG ESGRGQSPTG NADHNGKCNK 180 KRKDEEDEND ENGNDNEDPT TQKRARVVWS IELHRKFVAA VGQLGIEKAV PKRILDLMNV 240 DRLTRENVAS HLQALKYRLY LKRINSVQTQ QANMVAALGG RDYVRMGSLD GLGDFRTLGG 300 SGRYTHAALS SYSSGGMLGR LNSAAGLTIR NLTASQLLQP SHGQNLSNPV NAFTKMEPNI 360 PPASQNASIF QGIPASLELD QLQKTESTSH IPLDESRLLT SDVLGCSSNS LSNVPNNPML 420 LQGNPLQPLT GGGFGNQHSP NMTPFSSDSF NAGVNGSSNF LEHGQNSVQL SKFQSSSFPL 480 TQSFISSHLP QNSSRETATH LQNSPLDFTF PNSVSPPFED SRGEIQYRQN MTGAVQSMNQ 540 IPSQSWVDNK QLYSHNSNNT PGNNFSSQVP NNGSMASLSH NMNQSNENFS RRTDMSLIGR 600 SNGGSSTLVQ HNEHEKLTPG SRTRSNEEYL LESTKQGVLG FSPQGYDSLD DLMTAMKREQ 660 DGGMLAEGTI WI

Sequence ? help Back to Top

Protein Sequence Length: 672 aa Download sequence

MTVEEIRGNM GGGDNFPIGM RVLAVDDDPI CLKVLDSLLR KCQYQVTTTS QARVALKMLR  60
ENKDRFDLVI SDVHMPDMDG FKLLELVGLE MDLPVIMLSA NSETRLVMKG ISHGACDYLV  120
KPIRIEELRN IWQHVIRRKK VEPKTQSKSN NHVKSNHESG ESGRGQSPTG NADHNGKCNK  180
KRKDEEDEND ENGNDNEDPT TQKRARVVWS IELHRKFVAA VGQLGIEKAV PKRILDLMNV  240
DRLTRENVAS HLQALKYRLY LKRINSVQTQ QANMVAALGG RDYVRMGSLD GLGDFRTLGG  300
SGRYTHAALS SYSSGGMLGR LNSAAGLTIR NLTASQLLQP SHGQNLSNPV NAFTKMEPNI  360
PPASQNASIF QGIPASLELD QLQKTESTSH IPLDESRLLT SDVLGCSSNS LSNVPNNPML  420
LQGNPLQPLT GGGFGNQHSP NMTPFSSDSF NAGVNGSSNF LEHGQNSVQL SKFQSSSFPL  480
TQSFISSHLP QNSSRETATH LQNSPLDFTF PNSVSPPFED SRGEIQYRQN MTGAVQSMNQ  540
IPSQSWVDNK QLYSHNSNNT PGNNFSSQVP NNGSMASLSH NMNQSNENFS RRTDMSLIGR  600
SNGGSSTLVQ HNEHEKLTPG SRTRSNEEYL LESTKQGVLG FSPQGYDSLD DLMTAMKREQ  660
DGGMLAEGTI WI

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G25180.1	1e-118	ARR-B family protein