PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PHU11178.1

Organism

Capsicum chinense

Taxonomic ID

80379

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum

Family

FAR1

Protein Properties

Length: 475aa MW: 54397.4 Da PI: 4.9117

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PHU11178.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	28.6	4.6e-09	109	148	52	91
FAR1 52 rrtraetrtgCkaklkvkkekdgkwevtkleleHnHelap 91 + +++++r++Cka+++ + ++dg +vtk+ leHnHel p PHU11178.1 109 EARNQSKRVDCKARVNFQVMNDGSCVVTKVILEHNHELEP 148 56899********************************975 PP

Sequence ? help Back to Top
Protein Sequence Length: 475 aa Download sequence
MDDNECNNQL RAKLHDVFDL EDSDSLHGNE DSYGGYAEGP DRYLDTDDED LQNLADEEMN 60 RCRQSVEDKD LSVSYGEEDD YEEDDVEEEE GPMHDDSYTE EQYTAGLVEA RNQSKRVDCK 120 ARVNFQVMND GSCVVTKVIL EHNHELEPAP SRFLPCHREL SKMVKMSLVA HDIASLRPSK 180 SIRLLEVEAG GLERMRYCIW HIFMKLPVKL KEVTNYKPAK ARFKAIIFDN ITIGEFEDKW 240 YESMHAFFDG YISGRSSLKQ FVEKYEVALR FVHVEGPRST ETDLRINAHA AEMLRDGDLD 300 TMMYTRREKA VKVGVAVADE SVKVVEEVGC GSRGGRDDDA NVKMSNPPSN PHGAYPSHAL 360 PQYKYVAINP LKSLYTQWMP LCVNDYFSLN LTPVTIFHEA EVIAQVAITG INGYRKICKG 420 WRRFIRATNF TEGDVLHMLL LRSSEYSVKI VVLNKDLHLR FLIALEEPFS LLIRH

Sequence ? help Back to Top

Protein Sequence Length: 475 aa Download sequence

MDDNECNNQL RAKLHDVFDL EDSDSLHGNE DSYGGYAEGP DRYLDTDDED LQNLADEEMN  60
RCRQSVEDKD LSVSYGEEDD YEEDDVEEEE GPMHDDSYTE EQYTAGLVEA RNQSKRVDCK  120
ARVNFQVMND GSCVVTKVIL EHNHELEPAP SRFLPCHREL SKMVKMSLVA HDIASLRPSK  180
SIRLLEVEAG GLERMRYCIW HIFMKLPVKL KEVTNYKPAK ARFKAIIFDN ITIGEFEDKW  240
YESMHAFFDG YISGRSSLKQ FVEKYEVALR FVHVEGPRST ETDLRINAHA AEMLRDGDLD  300
TMMYTRREKA VKVGVAVADE SVKVVEEVGC GSRGGRDDDA NVKMSNPPSN PHGAYPSHAL  360
PQYKYVAINP LKSLYTQWMP LCVNDYFSLN LTPVTIFHEA EVIAQVAITG INGYRKICKG  420
WRRFIRATNF TEGDVLHMLL LRSSEYSVKI VVLNKDLHLR FLIALEEPFS LLIRH