PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PHU10823.1

Organism

Capsicum chinense

Taxonomic ID

80379

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum

Family

bHLH

Protein Properties

Length: 334aa MW: 37336.6 Da PI: 6.4128

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PHU10823.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	30.6	6.1e-10	59	107	2	54
HHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 2 rrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 ++ + rE+ RRdr+N+ f eL + l ++ +K++Ka+iL +v+ +k+L PHU10823.1 59 KVLKADREKLRRDRLNEQFMELGKTLDPD----RPKNDKASILSDTVQMLKDL 107 566789******************997....79**************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 334 aa Download sequence
MDQLNHGGGL YQPNQLPNHC LTELNQLPSD VSMPSNGLLS ESSKQKPEAE LKDSIAARKV 60 LKADREKLRR DRLNEQFMEL GKTLDPDRPK NDKASILSDT VQMLKDLTAQ VSRLKSEYAA 120 LTDESRELTQ EKNDLREEKT SLKSDIESLN AQYQQRMRSM YPWAGMDHSL VMHPPSYSYP 180 MPVPVPTGPV PMHPSLQPYP FFSNHNPAVV PNPSSYVQYM TSNTLIEQQP TQYMSPVIQP 240 GSVIRQESRN KFSDQGESRT EKNEDSNEVA TDLELKTPGS TSEQDLSSGQ KKPRKLPKKD 300 NSLTDGNSSS RCSSSHSVQA VSSNSVVRGT KSDD

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	291	299	KKPRKLPKK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G19860.1	2e-80	bHLH family protein