PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHU10674.1
Organism
Capsicum chinense
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family GATA
Protein Properties Length: 332aa    MW: 36803.7 Da    PI: 6.3655
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHU10674.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA57.91.4e-18250283134
        GATA   1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkg 34 
                 C++C++ kTp+WR gp g+ktLCnaCG++y++ +
  PHU10674.1 250 CTHCQVQKTPQWRAGPLGPKTLCNACGVRYKSGR 283
                 *******************************987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 332 aa     Download sequence    
MELIEARALK PSLLSDMAMK NTQQVFIDDL WCVTGFNNGA NDDFEVDDLL DFSDKDFKDG  60
CLQELHEEDE KESFSGNSQN RNSQDSAFSG MESFGSLAGE LPIPVDELEN LEWLSQFVDD  120
TSSEFSLLCP AGGFKEKTGG FPQPRSEPMV MVRPVVKKMK VPVPCFPLPV PVKPRTKRSR  180
PAGRTWSFPS PTVSADSSSP TSSSYGSSPF PSVLFMNPVH DGDLFFSVEK PPLKKMKKSS  240
LTEPGSGRRC THCQVQKTPQ WRAGPLGPKT LCNACGVRYK SGRLYPEYRP ACSPTFSQEV  300
HSNSHRKVLE MRRKKETGEV IEPGLASMIS TC
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G66320.25e-40GATA family protein