PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHU10544.1
Organism
Capsicum chinense
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family B3
Protein Properties Length: 758aa    MW: 86807.7 Da    PI: 8.6518
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHU10544.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B338.32.3e-121412221198
                 HHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE- CS
          B3  11 lksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfr 98 
                 ++s  l++p +f+++hg +     t++l  ++   W v +  +k++++++l +GW +F + + +    f++Fk+ ++s+f   v++f+
  PHU10544.1 141 GSSLHLRIPDTFVQKHGDE--LLDTVKLIVPTDDFWCVGV--KKTGKMFWLHDGWHGFMEHHSVGCWYFLLFKYGQNSCF--SVHIFD 222
                 556569**********865..667****************..********************************999***..999987 PP
2B367.81.5e-21413501998
                 HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SS...SEE..EEEEE- CS
          B3   9 dvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgr...sefelvvkvfr 98 
                 +vl+++ l +p +f++e++ k  +s  + l+d++g++W+v+    +++ r++l++GW+eFv++n L +gD +vF+l+++   +++ l+v++fr
  PHU10544.1 413 NVLRNHTLNIPADFVREYMPK--TSGLIELQDSDGNKWNVRR--IRRKMRMILSRGWSEFVRDNSLVVGDACVFELIKDlqaHKRMLKVHIFR 501
                 6899**************855..4559***************..8999999************************997651244556677766 PP
3B3665.5e-216166981196
                 HHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SS.SEE..EEEE CS
          B3  11 lksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgr.sefelvvkv 96 
                  ++ +l +p  f+++++ k  +s +++led++g++W+v +i  +++  ++l+kGW +Fv++ngL  gD++vF+l+++ +  el++kv
  PHU10544.1 616 VRNYILNIPPGFVQDYMPK--TSEQIKLEDSDGNKWNVHCI--RRKTCMFLSKGWVNFVRDNGLVIGDTCVFELIKDiQADELMLKV 698
                 5667899*********855..5668***************4..44444679**********************99888777766554 PP
Sequence ? help Back to Top
Protein Sequence    Length: 758 aa     Download sequence    
MVVRSLDVNK DPFRPQQKNE ELLGPEIPYL SVIGALMYLA NTTRPDIAFS VNLLVSDKAY  60
MEEEEDEKEE DAKKALHSKR KYVEEEEDEE EEHKEENEKA DIFKKNASCS KVGTDDVQMK  120
TCSQISVRFV TTYNIVFDDF GSSLHLRIPD TFVQKHGDEL LDTVKLIVPT DDFWCVGVKK  180
TGKMFWLHDG WHGFMEHHSV GCWYFLLFKY GQNSCFSVHI FDLAATEIDY QFRSHGNAKL  240
RDVAQDLSHR KDKIVGGKSS VEIVDLLETE QGPENSAKSS ELSHGAKRRK MASGRIKHLR  300
CCETRGKANK LYDDEQLLNG EKLNISGISL TEPLGANFVR QSMKAPIHSA AATRDARISF  360
TGQQREKSVL HGSTDNRGKR GRPRAAEANR ATNAAKMFTP ENPHFMTTLG GYNVLRNHTL  420
NIPADFVREY MPKTSGLIEL QDSDGNKWNV RRIRRKMRMI LSRGWSEFVR DNSLVVGDAC  480
VFELIKDLQA HKRMLKVHIF RSRVEENSTN LRTGSISEPT RSTGKNCTLQ FNETKHTESS  540
DPFEPASSDR TNHQTNTKSS FTGQQWEKSV LRGSTNNRRK RGRPRLAEAN RANDAAKMFM  600
SENPYFMVTL GEYNTVRNYI LNIPPGFVQD YMPKTSEQIK LEDSDGNKWN VHCIRRKTCM  660
FLSKGWVNFV RDNGLVIGDT CVFELIKDIQ ADELMLKVHI FRKKLRPKMS FGELFLRIYS  720
ILSAVAKKLM LDTLLEILAT YNCNLLVLWH LNNENDKI
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1452458RIRRKMR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G18990.13e-38B3 family protein