PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHU10543.1
Organism
Capsicum chinense
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family B3
Protein Properties Length: 280aa    MW: 32492.1 Da    PI: 10.0858
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHU10543.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B353.15.9e-1717981199
                HHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE-S CS
          B3 11 lksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfrk 99
                +++  l++p  f++++++  e++ + tl+ +sg  W+vkl  r   ++ ++ +GW +F k n+L++g+f+vF++dg  +f  +v++f k
  PHU10543.1 17 FTRE-LRIPAYFLRHISE--ESPEKATLKCLSGGIWNVKL--RYDEDGLLIHNGWDKFQKNNQLEDGEFLVFRYDGGLQF--TVRIFTK 98
                5554.9*******88864..46778***************..778888**************************986666..9999876 PP
2B363.92.5e-20175268199
                 EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE-S CS
          B3   1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfrk 99 
                 f+k l+  +v+ks+ l++pk+f e+ +++  +++t++l++++ ++W+v++i rk+ ++  + +GW++Fv+ n+Lkeg ++vF+l++    el+v+vf++
  PHU10543.1 175 FVKCLKGYNVNKSCFLYVPKSFYEQLMKSD-NKTTVVLRNSEEKEWKVNCIGRKGYRA--FCGGWRQFVSGNKLKEGYVCVFQLVN--ANELKVSVFDN 268
                 788899999**************9996554.557****************66666655..668********************986..56669*99987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 280 aa     Download sequence    
MKMDNRPIFY KIFRPTFTRE LRIPAYFLRH ISEESPEKAT LKCLSGGIWN VKLRYDEDGL  60
LIHNGWDKFQ KNNQLEDGEF LVFRYDGGLQ FTVRIFTKNG LEREVKSTAT GKNQQASVYD  120
RGSKHKRPAK YPFSSKFSEQ TRANGENSTE RETPRKRAAV DKVEEGLLTP NIRQFVKCLK  180
GYNVNKSCFL YVPKSFYEQL MKSDNKTTVV LRNSEEKEWK VNCIGRKGYR AFCGGWRQFV  240
SGNKLKEGYV CVFQLVNANE LKVSVFDNPS ESLLKLAAER
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G33280.11e-23B3 family protein