PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHU10449.1
Organism
Capsicum chinense
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family C2H2
Protein Properties Length: 336aa    MW: 39073.5 Da    PI: 9.965
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHU10449.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H212.50.00045249272123
                 EEETTTTEEESSHHHHHHHHHH.T CS
     zf-C2H2   1 ykCpdCgksFsrksnLkrHirt.H 23 
                 y+C+ Cg+ ++++ +LkrH +  H
  PHU10449.1 249 YVCSVCGRKCKTHLDLKRHFKQlH 272
                 9******************98767 PP
Sequence ? help Back to Top
Protein Sequence    Length: 336 aa     Download sequence    
MTIETRPDYC LGPHLRQMLS YSCMRLEIGV QSTYEDVARD TNRGHTVAAV ADCFCLAKDA  60
GFKVVAHMMP DLPNVGVERD LESFKEFFES PSFRADGLKI YPTLVIRGTG LYELWKTGRY  120
RNYPPEQLVD IVARILSMVP PWTRVYRVQR DIPMGYASAG IQDIHYKIKP KKVVILWDLD  180
NKPPRGTSYE AAMSLKKVAQ CFGEVVDMSA YANRHAFIHL PRWVVEQRRE RRHLGILERK  240
GVVTPSEPYV CSVCGRKCKT HLDLKRHFKQ LHERERGKKL SRMRSLKGRK RHRFKERFVD  300
GNYKYRDFMF GFHLILSTLQ MFSLERAGCC SPTLMD
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G52010.19e-71C2H2 family protein